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Feature request: measurment diagnostics #189

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daniellenewby opened this issue Jan 17, 2025 · 1 comment
Open

Feature request: measurment diagnostics #189

daniellenewby opened this issue Jan 17, 2025 · 1 comment
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enhancement New feature or request

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@daniellenewby
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Hi! It would be really useful to have diagnostics on measurement concepts if possible. So if a codelist contains measurement concepts then a argument to do this addtional diagnostic and just on the measurement concepts. So a summary of what measurements, ranges, units, missingness etc.

@daniellenewby daniellenewby added the enhancement New feature or request label Jan 17, 2025
@edward-burn
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Sounds very useful to me!

Probably could

  • add a new function measurementDiagnostics() and add as an argument in phentoypeDiagnostics() like the others
  • In measurementDiagnostics() add some specific checks on measurement records - value_as_number, value_as_concept_id, unit_concept_id etc (and associated source values) - can just start with something basic and build up
  • Add associated table and plot functions in the shiny app

If we see we are wanting more and more measurement checks then we can separate out the code into a separate package

Can use your study as a test case @daniellenewby, and also try for some other obvious examples (bmi, blood tests, etc)

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