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parse_cime.cs.status
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parse_cime.cs.status
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#!/usr/bin/env perl
#=======================================================================
#
# Parse a cime5 cs.status file to give summary output
#
# Usage:
#
# ./parse_cime.cs.status <cs.status.id filename>
#
# Erik Kluzek
# Sep/19/2016
#
#=======================================================================
use Cwd;
use strict;
#use diagnostics;
use English;
use Getopt::Long;
use IO::File;
#-----------------------------------------------------------------------------------------------
# Set the directory that contains this scripts. If the command was issued using a
# relative or absolute path, that path is in $ProgDir. Otherwise assume the
# command was issued from the current working directory.
sub GetNameNDir {
(my $ProgName = $0) =~ s!(.*)/!!; # name of this script
my $ProgDir = $1; # name of directory containing this script -- may be a
# relative or absolute path, or null if the script is in
# the user's PATH
my $cmdline = "@ARGV"; # Command line arguments to script
my $cwd = getcwd(); # current working directory
my $scrdir; # absolute pathname of directory that contains this script
my $nm = "$ProgName::"; # name to use if script dies
if ($ProgDir) {
$scrdir = absolute_path($ProgDir);
} else {
$scrdir = $cwd;
}
return( $ProgName, $scrdir );
}
#-----------------------------------------------------------------------------------------------
sub usage {
my $ProgName = shift;
die <<EOF;
SYNOPSIS
$ProgName <cs.status file> [options]
REQUIRED OPTIONS
<cs.status files> cime5 cs.status. file(s) that will be run and parsed
At least one file needs to be given, but you can also
give a list of space seperated files.
OPTIONS
-die_on_duplicate Die if find a duplicate testname
-summarize [or -s] Summarize results into lists of tests in categories (pend, pass, fail etc.)
-sum_results_perline Summarize results categories of each test into one line
-help [or -h] Print usage to STDOUT.
-verbose [or -v] Make output more verbose.
-summarize and -sum_results_perline can NOT both be asked for as they contrdict each other.
EOF
}
#-----------------------------------------------------------------------------------------------
sub process_cmdline {
# Process command-line options.
my $ProgName = shift;
my %opts = (
csstatusfiles_ref => undef,
sumintocats => 0,
sumperline => 0,
dieondup => 0,
help => 0,
verbose => 0,
);
GetOptions(
"h|help" => \$opts{'help'},
"s|summarize" => \$opts{'sumintocats'},
"die_on_duplicate" => \$opts{'dieondup'},
"sum_results_perline" => \$opts{'sumperline'},
"v|verbose" => \$opts{'verbose'},
) or usage($ProgName);
# Give usage message.
usage($ProgName) if $opts{'help'};
# If bad input
if ( $opts{'sumintocats'} && $opts{'sumperline'} ) {
print "ERROR: options -summarize and -sum_results_perline contradict each other, choose one or the other or neither\n";
usage($ProgName);
}
# Get cs.status filenames
$opts{'csstatusfiles_ref'} = \@ARGV;
my $files_ref = $opts{'csstatusfiles_ref'};
if ( $#$files_ref == -1 ) {
print "ERROR: cs.status filename(s) was (were) NOT input\n";
usage($ProgName);
}
foreach my $file ( @$files_ref ) {
if ( ! -x $file ) {
print "ERROR: cs.status filename does NOT exist: $file\n";
usage($ProgName);
}
}
return( %opts );
}
#-------------------------------------------------------------------------------
sub absolute_path {
#
# Convert a pathname into an absolute pathname, expanding any . or .. characters.
# Assumes pathnames refer to a local filesystem.
# Assumes the directory separator is "/".
#
my $path = shift;
my $cwd = getcwd(); # current working directory
my $abspath; # resulting absolute pathname
# Strip off any leading or trailing whitespace. (This pattern won't match if
# there's embedded whitespace.
$path =~ s!^\s*(\S*)\s*$!$1!;
# Convert relative to absolute path.
if ($path =~ m!^\.$!) { # path is "."
return $cwd;
} elsif ($path =~ m!^\./!) { # path starts with "./"
$path =~ s!^\.!$cwd!;
} elsif ($path =~ m!^\.\.$!) { # path is ".."
$path = "$cwd/..";
} elsif ($path =~ m!^\.\./!) { # path starts with "../"
$path = "$cwd/$path";
} elsif ($path =~ m!^[^/]!) { # path starts with non-slash character
$path = "$cwd/$path";
}
my ($dir, @dirs2);
my @dirs = split "/", $path, -1; # The -1 prevents split from stripping trailing nulls
# This enables correct processing of the input "/".
# Remove any "" that are not leading.
for (my $i=0; $i<=$#dirs; ++$i) {
if ($i == 0 or $dirs[$i] ne "") {
push @dirs2, $dirs[$i];
}
}
@dirs = ();
# Remove any "."
foreach $dir (@dirs2) {
unless ($dir eq ".") {
push @dirs, $dir;
}
}
@dirs2 = ();
# Remove the "subdir/.." parts.
foreach $dir (@dirs) {
if ( $dir !~ /^\.\.$/ ) {
push @dirs2, $dir;
} else {
pop @dirs2; # remove previous dir when current dir is ..
}
}
if ($#dirs2 == 0 and $dirs2[0] eq "") { return "/"; }
$abspath = join '/', @dirs2;
return( $abspath );
}
sub run_csstatus {
# run a cs.status file and parse it's output
my ( $csstatusfilename, $verbose, $csstatus_ref, $dieondup ) = @_;
if ( ! -x $csstatusfilename ) {
die "ERROR: cs.status file does NOT exist or can not execute: $csstatusfilename\n";
}
my $csdate = undef;
if ( $csstatusfilename =~ /cs.status.([0-9_]+)/ ) {
$csdate = $1;
chomp( $csdate );
}
if ( $verbose ) { print "Parse file: $csstatusfilename\n"; }
my @lines = `$csstatusfilename`;
while ( my $line = shift(@lines) ) {
if ( $line =~ /([^ ]+) \(Overall: ([^ ,]+)\)/ ) {
my $test = $1;
my $over = $2;
my $fails = ""; my $passes = ""; my $pendings = "";
my $newline;
my $bfail = 0;
if ( $verbose ) { print "$test\n"; }
do {
$newline = shift(@lines);
if ( $newline =~ /FAIL[ ]+$test ([^ ]+)/ ) {
if ( $fails eq "" ) {
$fails = $1;
} else {
$fails .= " $1";
}
chomp( $fails );
if ( $1 eq "BASELINE" ) {
if ( $newline =~ /ERROR BFAIL baseline directory/ ) {
$bfail = 1;
}
}
} elsif ( $newline =~ /PASS[ ]+$test ([^ ]+)/ ) {
$passes .= " $1";
chomp( $passes );
} elsif ( $newline =~ /PEND[ ]+$test ([^ ]+)/ ) {
$pendings .= " $1";
chomp( $pendings );
} elsif ( (! $newline) || ($newline =~ /Overall:/) ) {
} else {
if ( $verbose ) { print "ERROR: parsing line: $newline\n"; }
}
} until ( (! $newline) || ($newline =~ /Overall:/) );
if ( $newline ) {
unshift( @lines, $newline );
}
if ( $over eq "NLFAIL" ) {
$over = "PASS";
}
elsif ( $over eq "NLCOMP" ) {
$over = "PASS";
}
elsif ( $over eq "DIFF" ) {
if ( $bfail ) {
$over = "FAIL_BDNE";
} else {
$over = "DIFF";
}
}
if ( exists($$csstatus_ref{$test}) ) {
if ( $dieondup ) {
die "ERROR: Already had a test that matches this one: $test\n";
}
next;
}
$$csstatus_ref{$test}{'over'} = $over;
$$csstatus_ref{$test}{'FAIL'} = $fails;
$$csstatus_ref{$test}{'PASS'} = $passes;
$$csstatus_ref{$test}{'PEND'} = $pendings;
if ( ! $newline ) { last; }
} else {
if ( $verbose ) { print( "WARNING: Didn't parse following line:\n$line" ); }
}
}
}
sub print_status {
# Print status info for each test
my %csstatus = @_;
foreach my $key ( keys(%csstatus) ) {
foreach my $type ( "PASS", "FAIL", "PEND" ) {
if ( $csstatus{$key}{$type} ne "" ) {
foreach my $phase ( split( / /, $csstatus{$key}{$type}) ) {
if ( $phase =~ /[^ ]+/ ) {
printf( "%-10s %-90s %s\n", $type, $key, $phase );
}
}
}
}
}
}
sub print_sumperline {
# Print summary info for each test
my %csstatus = @_;
foreach my $key ( keys(%csstatus) ) {
printf( "%-10s %-90s Passing: %s\n", $csstatus{$key}{'over'}, $key, $csstatus{$key}{'PASS'} );
if ( $csstatus{$key}{'FAIL'} ne "" ) {
printf( "%-10s %-90s %s\n", "FAIL", $key, $csstatus{$key}{'FAIL'} );
}
if ( $csstatus{$key}{'PEND'} ne "" ) {
printf( "%-10s %-90s %s\n", "PEND", $key, $csstatus{$key}{'PEND'} );
}
}
}
sub expectedFails {
# Query expected fail file for the input testname key
my ($key, $message, @failfiles) = @_;
my $expect = "";
my $expectedfails = "";
foreach my $expectedfailfile ( @failfiles ) {
my $fh = IO::File->new($expectedfailfile, '<') or die "ERROR:: failure opening $expectedfailfile\n";
while( my $line = <$fh> ) {
if ( $line =~ /$key/ ) {
$expect = $message;
# Read past the testname until the test end is found...
# Keep track of all of the expected fails and return it at the end
while( my $testline = <$fh> ) {
if ( $testline =~ /phase\s+name\s*=\s*\"([a-zA-Z0-9_]+)/ ) {
if ( $expectedfails eq "" ) {
$expectedfails = $1;
} else {
$expectedfails = "$expectedfails $1";
}
}
if ( $testline =~ /\<\/test\>/ ) { last; }
}
}
}
}
return( $expect, $expectedfails );
}
sub print_categories {
# Seperate tests into categories
my $scrdir = shift(@_);
my %csstatus = @_;
my $expectedfailfile = "$scrdir/components/clm/cime_config/testdefs/ExpectedTestFails.xml";
if ( ! -f $expectedfailfile ) {
$expectedfailfile = "$scrdir/cime_config/testdefs/ExpectedTestFails.xml";
}
my @failfiles = ( $expectedfailfile, "$scrdir/components/mizuRoute/cime_config/testdefs/ExpectedTestFails.xml" );
my @passes;
my @fails;
my @pendings;
my @compares_diff;
my @compares_diff_nobase;
my @keys = sort( keys(%csstatus) );
foreach my $key ( @keys ) {
if ( $csstatus{$key}{'over'} eq "PASS" ) {
push( @passes, $key );
} elsif ( $csstatus{$key}{'over'} eq "DIFF" ) {
push( @passes, $key );
push( @compares_diff, $key );
} elsif ( $csstatus{$key}{'over'} eq "FAIL_BDNE" ) {
push( @passes, $key );
push( @compares_diff_nobase, $key );
} elsif ( $csstatus{$key}{'over'} eq "FAIL" ) {
push( @fails, $key );
} elsif ( $csstatus{$key}{'over'} eq "PEND" ) {
push( @pendings, $key );
} else {
print( "WARNING: unclassified overall status: $key, $csstatus{$key}{'over'}\n" );
}
}
print( "================================================================================\n" );
print( "Test summary\n" );
printf( "%d Total tests\n", $#keys+1 );
printf( "%d Tests passed\n", $#passes+1 );
printf( "%d Tests compare different to baseline\n", $#compares_diff+1 );
printf( "%d Tests are new where there is no baseline\n", $#compares_diff_nobase+1 );
printf( "%d Tests pending\n", $#pendings+1 );
printf( "%d Tests failed\n", $#fails+1 );
print( "================================================================================\n" );
if ( $#passes >= 0 ) {
print( "================================================================================\n" );
print( "These tests passed\n" );
print( "================================================================================\n" );
foreach my $key ( @passes ) {
my ($expect, $expectFails) = &expectedFails( $key, "FAILED PREVIOUSLY", @failfiles );
if ( $expect ne "" ) { $expect = "$expect ($expectFails)"; }
if ($expectFails =~ /BASELINE/ ) { $expect = ""; }
print( "$key\t\t\t$expect\n" );
}
}
if ( $#compares_diff >= 0 ) {
print( "================================================================================\n" );
print( "These tests compare different to the baseline\n" );
print( "================================================================================\n" );
foreach my $key ( @compares_diff ) {
my ($expect, $expectFails) = &expectedFails( $key, "EXPECTED POSSIBILITY", @failfiles );
if ($expectFails !~ /BASELINE/ ) { $expect = ""; }
print( "$key\t\t$expect\n" );
}
}
if ( $#compares_diff_nobase >= 0 ) {
print( "================================================================================\n" );
print( "These tests don't have a baseline to compare to\n" );
print( "================================================================================\n" );
foreach my $key ( @compares_diff_nobase ) {
print( "$key\n" );
}
}
if ( $#pendings >= 0 ) {
print( "================================================================================\n" );
print( "These tests are pending (some tests may fail in the pending state)\n" );
print( "================================================================================\n" );
foreach my $key ( @pendings ) {
my ($expect, $expectFails) = &expectedFails( $key, "EXPECTED", @failfiles );
if ( $expect ne "" ) { $expect = "$expect ($expectFails)"; }
print( "$key\t\t$expect\n" );
}
}
if ( $#fails >= 0 ) {
print( "================================================================================\n" );
print( "These tests failed\n" );
print( "Test (what Failed) EXPECTED (what expected to fail)\n" );
print( "================================================================================\n" );
foreach my $key ( @fails ) {
my ($expect, $expectFails) = &expectedFails( $key, "EXPECTED", @failfiles );
if ( $expect ne "" ) { $expect = "$expect ($expectFails)"; }
my $fails = $csstatus{$key}{'FAIL'};
print( "$key\t($fails)\t\t$expect\n" );
}
}
}
#-----------------------------------------------------------------------------------------------
sub main {
# main subroutine
my ($ProgName, $scrdir) = &GetNameNDir( );
my $pwd = `pwd`;
chomp( $pwd );
my %opts = &process_cmdline( $ProgName );
my %csstatus;
my $files_ref = $opts{'csstatusfiles_ref'};
foreach my $file ( @$files_ref ) {
&run_csstatus( "$pwd/$file", $opts{'verbose'}, \%csstatus, $opts{'dieondup'} );
}
if ( $opts{'verbose'} ) {
print "Print summary of testing:\n";
}
if ( $opts{'sumintocats'} ) {
&print_categories( $scrdir, %csstatus );
} elsif ( $opts{'sumperline'} ) {
&print_sumperline( %csstatus );
} else {
&print_status( %csstatus );
}
}
# Invoke the main subroutine
&main();