Error in FragPipe Analyst #36
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TeckYewLow
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@TeckYewLow Do you have MaxLFQ columns available in your combined_protein.txt file? I couldn't reproduce using our testing datasets. Or do you mind sharing your files to figure out what's the issue? [email protected] |
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Closed due to no response. |
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Hi,
I was loading the LFQ file and annotation. Suddenly I got this error message: "The labels/'run names' in the experimental design DID NOT match with lfq column names in maxquants proteinGroups file Run LFQ-Analyst with correct labels in the experimental design"
Please advise me what I should do. For your information I chose "MaxLFQ" as intensity type. If I had chose "Intensity" as intensity type, it would run just fine.
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