pom.xml

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>
  <groupId>org.uma.khaos.m2align</groupId>
  <artifactId>m2align</artifactId>
  <version>1.3-SNAPSHOT</version>
  <packaging>jar</packaging>
  <properties>
    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
    <maven.compiler.source>1.8</maven.compiler.source>
    <maven.compiler.target>1.8</maven.compiler.target>
  </properties>

  <scm>
    <connection>scm:git://git@github.com:KhaosResearch/M2Align.git</connection>
    <developerConnection>scm:git:https://github.com/KhaosResearch/M2Align.git</developerConnection>
    <url>https://github.com/KhaosResearch/M2Align.git</url>
    <tag>m2align-1.1</tag>
  </scm>

  <distributionManagement>
    <snapshotRepository>
      <id>ossrh</id>
      <url>https://oss.sonatype.org/content/repositories/snapshots</url>
    </snapshotRepository>
    <repository>
      <id>ossrh</id>
      <url>https://oss.sonatype.org/service/local/staging/deploy/maven2/</url>
    </repository>
  </distributionManagement>

  <licenses>
    <license>
      <name>The MIT License (MIT)</name>
      <url>http://opensource.org/licenses/MIT</url>
      <distribution>repo</distribution>
    </license>
  </licenses>

  <profiles>
    <profile>
      <id>doclint-java8-disable</id>
      <activation>
        <jdk>[1.8,)</jdk>
      </activation>
      <properties>
        <javadoc.opts>-Xdoclint:none</javadoc.opts>
      </properties>
    </profile>
  </profiles>

  <reporting>
    <plugins>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-javadoc-plugin</artifactId>
        <version>2.9.1</version>
        <configuration>
          <additionalparam>-Xdoclint:none</additionalparam>
        </configuration>
      </plugin>
    </plugins>
  </reporting>


  <build>
    <plugins>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-compiler-plugin</artifactId>
        <version>3.1</version>
        <configuration>
          <!-- or whatever version you use -->
          <source>1.8</source>
          <target>1.8</target>
          <encoding>UTF-8</encoding>
        </configuration>
      </plugin>
      <plugin>
        <artifactId>maven-assembly-plugin</artifactId>
        <version>2.4</version>
        <configuration>
          <descriptorRefs>
            <descriptorRef>jar-with-dependencies</descriptorRef>
          </descriptorRefs>
        </configuration>
        <executions>
          <execution>
            <id>make-assembly</id>
            <phase>package</phase>
            <goals>
              <goal>single</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-javadoc-plugin</artifactId>
        <version>2.9.1</version>
        <executions>
          <execution>
            <id>attach-javadocs</id>
            <goals>
              <goal>jar</goal>
            </goals>
          </execution>
        </executions>
        <configuration>
          <additionalparam>${javadoc.opts}</additionalparam>
          <encoding>UTF-8</encoding>
        </configuration>
      </plugin>
    </plugins>
  </build>

  <dependencies>
    <dependency>
      <groupId>org.uma.jmetal</groupId>
      <artifactId>jmetal-core</artifactId>
      <version>5.5</version>
    </dependency>
    <dependency>
      <groupId>org.uma.jmetal</groupId>
      <artifactId>jmetal-algorithm</artifactId>
      <version>5.5</version>
    </dependency>
    <dependency>
      <groupId>org.jmockit</groupId>
      <artifactId>jmockit</artifactId>
      <version>1.28</version>
    </dependency>
    <dependency>
      <groupId>org.jmockit</groupId>
      <artifactId>jmockit-coverage</artifactId>
      <version>1.23</version>
    </dependency>
    <dependency>
      <groupId>junit</groupId>
      <artifactId>junit</artifactId>
      <version>4.13.1</version>
      <scope>test</scope>
    </dependency>
    <dependency>
      <groupId>org.mockito</groupId>
      <artifactId>mockito-all</artifactId>
      <version>1.10.19</version>
    </dependency>
    <dependency>
      <groupId>org.springframework</groupId>
      <artifactId>spring-test</artifactId>
      <version>4.1.6.RELEASE</version>
    </dependency>
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-lang3</artifactId>
      <version>3.4</version>
    </dependency>
    <dependency>
      <groupId>org.biojava</groupId>
      <artifactId>biojava-alignment</artifactId>
      <version>4.0.0</version>
    </dependency>
  </dependencies>

</project>