How to fix : Error in ||: 'length = 3' in coercion to 'logical(1)

[Atom5427]

Hi, I recently started using cytofkit2 to analyze fcs files. However, when I started loading the fcs file, it always stuck due to error: Warning: Error in ||: 'length = 3' in coercion to 'logical(1)'. I tried to find solution online and asked chatgpt for help. But all failed. Please help. Thanks.

[Atom5427]

Here is my sessioninfo:
R version 4.4.1 (2024-06-14 ucrt)
Platform: x86_64-w64-mingw32/x64
Running under: Windows 11 x64 (build 22631)

Matrix products: default

locale:
[1] LC_COLLATE=English_United States.utf8
[2] LC_CTYPE=English_United States.utf8
[3] LC_MONETARY=English_United States.utf8
[4] LC_NUMERIC=C
[5] LC_TIME=English_United States.utf8

time zone: America/Chicago
tzcode source: internal

attached base packages:
[1] splines stats4 stats graphics grDevices utils datasets
[8] methods base

other attached packages:
[1] flowCore_2.14.2 data.table_1.16.2 shinyWidgets_0.8.7
[4] shinyFiles_0.9.3 shinyalert_3.1.0 shinydashboard_0.7.2
[7] DT_0.33 shinyjs_2.1.0 plotly_4.10.4.9000
[10] pheatmap_1.0.12 cowplot_1.1.3 RColorBrewer_1.1-3
[13] rmarkdown_2.28 gplots_3.2.0 colourpicker_1.3.0
[16] reshape2_1.4.4 shiny_1.9.1 cytofkit2_0.99.80
[19] VGAM_1.1-12 reticulate_1.39.0 plyr_1.8.9
[22] ggplot2_3.5.1

loaded via a namespace (and not attached):
[1] rstudioapi_0.17.0 jsonlite_1.8.9
[3] umap_0.2.10.0 magrittr_2.0.3
[5] farver_2.1.2 fs_1.6.4
[7] vctrs_0.6.5 memoise_2.0.1
[9] askpass_1.2.1 rstatix_0.7.2
[11] htmltools_0.5.8.1 broom_1.0.7
[13] Formula_1.2-5 sass_0.4.9
[15] KernSmooth_2.23-24 bslib_0.8.0
[17] fontawesome_0.5.2 htmlwidgets_1.6.4
[19] cachem_1.1.0 igraph_2.0.3
[21] mime_0.12 lifecycle_1.0.4
[23] iterators_1.0.14 pkgconfig_2.0.3
[25] Matrix_1.7-0 R6_2.5.1
[27] fastmap_1.2.0 digest_0.6.37
[29] colorspace_2.1-1 ggnewscale_0.5.0
[31] S4Vectors_0.40.2 RSpectra_0.16-2
[33] ggpubr_0.6.0 vegan_2.6-8
[35] pdist_1.2.1 cytolib_2.16.0
[37] fansi_1.0.6 colorRamps_2.3.4
[39] httr_1.4.7 polyclip_1.10-7
[41] abind_1.4-8 mgcv_1.9-1
[43] compiler_4.4.1 proxy_0.4-27
[45] withr_3.0.1 doParallel_1.0.17
[47] ConsensusClusterPlus_1.68.0 backports_1.5.0
[49] carData_3.0-5 ggforce_0.4.2
[51] ggsignif_0.6.4 MASS_7.3-61
[53] openssl_2.2.2 FlowSOM_2.10.0
[55] gtools_3.9.5 caTools_1.18.3
[57] permute_0.9-7 tools_4.4.1
[59] httpuv_1.6.15 glue_1.8.0
[61] nlme_3.1-166 promises_1.3.0
[63] grid_4.4.1 Rtsne_0.17
[65] cluster_2.1.6 generics_0.1.3
[67] gtable_0.3.5 class_7.3-22
[69] tidyr_1.3.1 car_3.1-3
[71] utf8_1.2.4 BiocGenerics_0.50.0
[73] ggrepel_0.9.6 RANN_2.6.2
[75] foreach_1.5.2 pillar_1.9.0
[77] stringr_1.5.1 later_1.3.2
[79] dplyr_1.1.4 tweenr_2.0.3
[81] lattice_0.22-6 RProtoBufLib_2.16.0
[83] tidyselect_1.2.1 miniUI_0.1.1.1
[85] knitr_1.48 xfun_0.48
[87] Biobase_2.62.0 matrixStats_1.4.1
[89] stringi_1.8.4 lazyeval_0.2.2
[91] evaluate_1.0.1 codetools_0.2-20
[93] tibble_3.2.1 cli_3.6.3
[95] xtable_1.8-4 munsell_0.5.1
[97] jquerylib_0.1.4 Rcpp_1.0.13
[99] png_0.1-8 XML_3.99-0.17
[101] parallel_4.4.1 bitops_1.0-9
[103] viridisLite_0.4.2 scales_1.3.0
[105] e1071_1.7-16 crayon_1.5.3
[107] purrr_1.0.2 rlang_1.1.4