From 2dd7fe859a5acf08a6e7b84771ddd1f93cc4fef4 Mon Sep 17 00:00:00 2001 From: Indrajeet Patil Date: Wed, 22 Jan 2020 14:14:02 +0100 Subject: [PATCH] getting ready for cran submission --- .travis.yml | 244 ++++++------ DESCRIPTION | 4 +- README.Rmd | 10 +- README.md | 14 +- codemeta.json | 4 +- docs/404.html | 2 +- docs/CODE_OF_CONDUCT.html | 2 +- docs/CONTRIBUTING.html | 2 +- docs/LICENSE-text.html | 2 +- docs/LICENSE.html | 2 +- docs/SUPPORT.html | 2 +- docs/articles/index.html | 2 +- docs/articles/stats_details.html | 6 +- .../header-attrs-2.1/header-attrs.js | 12 + docs/articles/tests_and_coverage.html | 356 +++++++++--------- .../header-attrs-2.1/header-attrs.js | 12 + docs/authors.html | 2 +- docs/index.html | 16 +- docs/news/index.html | 2 +- docs/pkgdown.yml | 2 +- docs/reference/Titanic_full.html | 28 +- docs/reference/VR_dilemma.html | 26 +- docs/reference/bf_contingency_tab.html | 2 +- docs/reference/bf_corr_test.html | 8 +- docs/reference/bf_expr.html | 2 +- docs/reference/bf_extractor.html | 8 +- docs/reference/bf_meta.html | 16 +- docs/reference/bf_oneway_anova.html | 12 +- docs/reference/bf_ttest.html | 28 +- docs/reference/bugs_long.html | 30 +- docs/reference/effsize_ci_message.html | 2 +- docs/reference/effsize_t_parametric.html | 32 +- docs/reference/expr_anova_bayes.html | 2 +- docs/reference/expr_anova_nonparametric.html | 2 +- docs/reference/expr_anova_parametric.html | 2 +- docs/reference/expr_anova_robust.html | 2 +- docs/reference/expr_contingency_tab.html | 2 +- docs/reference/expr_corr_test.html | 2 +- docs/reference/expr_meta_parametric.html | 18 +- docs/reference/expr_meta_robust.html | 2 +- docs/reference/expr_t_bayes.html | 2 +- docs/reference/expr_t_nonparametric.html | 2 +- docs/reference/expr_t_onesample.html | 2 +- docs/reference/expr_t_parametric.html | 2 +- docs/reference/expr_t_robust.html | 2 +- docs/reference/expr_template.html | 2 +- docs/reference/index.html | 2 +- docs/reference/intent_morality.html | 36 +- docs/reference/iris_long.html | 30 +- docs/reference/long_to_wide_converter.html | 28 +- docs/reference/movies_long.html | 48 +-- docs/reference/movies_wide.html | 58 +-- docs/reference/reexports.html | 2 +- docs/reference/robcor_ci.html | 8 +- docs/reference/t1way_ci.html | 8 +- docs/reference/yuend_ci.html | 12 +- inst/WORDLIST | 2 + tests/README.md | 146 +++---- vignettes/tests_and_coverage.Rmd | 206 +++++----- 59 files changed, 759 insertions(+), 763 deletions(-) create mode 100644 docs/articles/stats_details_files/header-attrs-2.1/header-attrs.js create mode 100644 docs/articles/tests_and_coverage_files/header-attrs-2.1/header-attrs.js diff --git a/.travis.yml b/.travis.yml index e41b0829..694911fc 100644 --- a/.travis.yml +++ b/.travis.yml @@ -1,151 +1,121 @@ -# documentation at https://docs.travis-ci.com/user/languages/r - language: r -dist: trusty -cache: packages latex: true -warnings_are_errors: true +warnings_are_errors: TRUE -repos: - CRAN: https://cloud.r-project.org - ropensci: http://packages.ropensci.org +cache: + - packages + - ccache -env: - global: - - R_MAX_NUM_DLLS=999 - - _R_CHECK_FORCE_SUGGESTS_=true - - _R_CHECK_CRAN_INCOMING_=true - - MAKEFLAGS="-j 2" +jobs: + include: + - r: devel + r_binary_packages: + - magrittr + - curl + - jsonlite + - rstan + - Rcpp + - RcppEigen + - openssl + - utf8 + - gss + - haven + - minqa + - mvtnorm + - nloptr + - SparseM + - httpuv + - markdown + - sem + - readxl + - openxlsx + - pander + - lme4 + - psych + - git2r + - rlang + - bindrcpp + - tidyr + - dplyr + - rstantools + - bridgesampling + - BH + - stringi + - metaBMA + r_packages: + - coin + - sjstats + - WRS2 + - coda + - remotes + - knitr + - rmarkdown + r_github_packages: + - jimhester/lintr + - r-lib/covr + - r: release + r_binary_packages: + - magrittr + - curl + - jsonlite + - rstan + - Rcpp + - RcppEigen + - openssl + - utf8 + - gss + - haven + - minqa + - mvtnorm + - nloptr + - SparseM + - httpuv + - markdown + - sem + - readxl + - openxlsx + - pander + - lme4 + - psych + - git2r + - rlang + - bindrcpp + - tidyr + - dplyr + - rstantools + - bridgesampling + - BH + - stringi + - metaBMA + r_packages: + - coin + - sjstats + - WRS2 + - coda + - remotes + - knitr + - rmarkdown + r_github_packages: + - jimhester/lintr + - r-lib/covr -#r_check_args: "--run-dontrun" +addons: + apt: + packages: + - libudunits2-dev + - libgdal-dev + - libproj-dev + +before_install: + - mkdir -p ~/.R + - echo "CXX14FLAGS=-O3 -mtune=native -march=native -Wno-unused-variable -Wno-unused-function -Wno-macro-redefined" >> ~/.R/Makevars + - echo "CXX14=g++ -std=c++1y -fPIC" >> ~/.R/Makevars notifications: email: on_success: change on_failure: change -jobs: - include: - - os: linux - dist: trusty - r: release - r_binary_packages: - - magrittr - - curl - - jsonlite - - rstan - - Rcpp - - RcppEigen - - openssl - - utf8 - - gss - - haven - - minqa - - mvtnorm - - nloptr - - SparseM - - httpuv - - markdown - - sem - - readxl - - openxlsx - - pander - - lme4 - - psych - - git2r - - data.table - - LaplacesDemon - - logspline - r_packages: - - rlang - - bindrcpp - - tidyr - - dplyr - - coin - - sjstats - - WRS2 - - coda - - rstantools - - bridgesampling - - BH - - remotes - - knitr - - rmarkdown - - stringi - r_github_packages: - - jimhester/lintr - - r-lib/covr - addons: - apt: - sources: - - ubuntu-toolchain-r-test - packages: - - g++-7 - env: - - MATRIX_EVAL="CC=gcc-7 && CXX=g++-7" - - os: linux - dist: trusty - r: devel - r_binary_packages: - - magrittr - - curl - - jsonlite - - rstan - - Rcpp - - RcppEigen - - openssl - - utf8 - - gss - - haven - - minqa - - mvtnorm - - nloptr - - SparseM - - httpuv - - markdown - - sem - - readxl - - openxlsx - - pander - - lme4 - - psych - - git2r - - data.table - - LaplacesDemon - - logspline - r_packages: - - rlang - - bindrcpp - - tidyr - - dplyr - - coin - - sjstats - - WRS2 - - coda - - rstantools - - bridgesampling - - BH - - remotes - - stringi - - knitr - - rmarkdown - r_github_packages: - - jimhester/lintr - - r-lib/covr - addons: - apt: - sources: - - ubuntu-toolchain-r-test - packages: - - g++-7 - env: - - MATRIX_EVAL="CC=gcc-7 && CXX=g++-7" - -before_install: - - mkdir -p ~/.R/ - - echo "CXX14 = g++-7 -fPIC" >> ~/.R/Makevars - - echo "CXX14FLAGS = -mtune=native -march=native -Wno-unused-variable -Wno-unused-function -Wno-unused-local-typedefs -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-attributes -O3" >> ~/.R/Makevars - after_success: - Rscript -e 'covr::codecov()' - Rscript -e 'covr::coveralls()' diff --git a/DESCRIPTION b/DESCRIPTION index 60fb4cce..104c01d7 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Type: Package Package: statsExpressions Title: Expressions with Statistical Details -Version: 0.2.0.9000 +Version: 0.2.1 Authors@R: c(person(given = "Indrajeet", family = "Patil", @@ -33,7 +33,7 @@ Imports: crayon (>= 1.3.4), dplyr (>= 0.8.3), ez (>= 4.4-0), - groupedstats (>= 0.1.0), + groupedstats (>= 0.1.1), metaBMA (>= 0.6.2), metafor (>= 2.1-0), metaplus (>= 0.7-11), diff --git a/README.Rmd b/README.Rmd index e0dcc46f..9c180a56 100644 --- a/README.Rmd +++ b/README.Rmd @@ -25,12 +25,12 @@ knitr::opts_chunk$set( Package | Status | Usage | GitHub | References ----------------- | ----------------- | ----------------- | ----------------- | ----------------- -[![CRAN_Release_Badge](http://www.r-pkg.org/badges/version-ago/statsExpressions)](https://CRAN.R-project.org/package=statsExpressions) | [![Build Status](https://travis-ci.org/IndrajeetPatil/statsExpressions.svg?branch=master)](https://travis-ci.org/IndrajeetPatil/statsExpressions) | [![Daily downloads badge](https://cranlogs.r-pkg.org/badges/last-day/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![GitHub version](https://img.shields.io/badge/GitHub-0.2.0.9000-orange.svg?style=flat-square)](https://github.com/IndrajeetPatil/statsExpressions/) | [![Website](https://img.shields.io/badge/website-statsExpressions-orange.svg?colorB=E91E63)](https://indrajeetpatil.github.io/statsExpressions/) +[![CRAN_Release_Badge](http://www.r-pkg.org/badges/version-ago/statsExpressions)](https://CRAN.R-project.org/package=statsExpressions) | [![Build Status](https://travis-ci.org/IndrajeetPatil/statsExpressions.svg?branch=master)](https://travis-ci.org/IndrajeetPatil/statsExpressions) | [![Daily downloads badge](https://cranlogs.r-pkg.org/badges/last-day/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![GitHub version](https://img.shields.io/badge/GitHub-0.2.1.9000-orange.svg?style=flat-square)](https://github.com/IndrajeetPatil/statsExpressions/) | [![Website](https://img.shields.io/badge/website-statsExpressions-orange.svg?colorB=E91E63)](https://indrajeetpatil.github.io/statsExpressions/) [![CRAN Checks](https://cranchecks.info/badges/summary/statsExpressions)](https://cran.r-project.org/web/checks/check_results_statsExpressions.html) | [![AppVeyor Build Status](https://ci.appveyor.com/api/projects/status/github/IndrajeetPatil/statsExpressions?branch=master&svg=true)](https://ci.appveyor.com/project/IndrajeetPatil/statsExpressions) | [![Weekly downloads badge](https://cranlogs.r-pkg.org/badges/last-week/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![Forks](https://img.shields.io/badge/forks-`r itdepends:::get_github_info("statsExpressions")$forks[[1]]`-blue.svg)](https://github.com/IndrajeetPatil/statsExpressions/) | [![Rdoc](https://www.rdocumentation.org/badges/version/statsExpressions)](https://www.rdocumentation.org/packages/statsExpressions) -[![minimal R version](https://img.shields.io/badge/R%3E%3D-3.5.0-6666ff.svg)](https://cran.r-project.org/) | [![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/) | [![Monthly downloads badge](https://cranlogs.r-pkg.org/badges/last-month/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![Github Issues](https://img.shields.io/badge/issues-`r itdepends:::get_github_info("statsExpressions")$open_issues[[1]]`-red.svg)](https://github.com/IndrajeetPatil/statsExpressions/issues) | [![vignettes](https://img.shields.io/badge/vignettes-0.2.0-orange.svg?colorB=FF5722)](https://CRAN.R-project.org/package=statsExpressions/vignettes/) +[![minimal R version](https://img.shields.io/badge/R%3E%3D-3.5.0-6666ff.svg)](https://cran.r-project.org/) | [![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/) | [![Monthly downloads badge](https://cranlogs.r-pkg.org/badges/last-month/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![Github Issues](https://img.shields.io/badge/issues-`r itdepends:::get_github_info("statsExpressions")$open_issues[[1]]`-red.svg)](https://github.com/IndrajeetPatil/statsExpressions/issues) | [![vignettes](https://img.shields.io/badge/vignettes-0.2.1-orange.svg?colorB=FF5722)](https://CRAN.R-project.org/package=statsExpressions/vignettes/) [![GitHub code size in bytes](https://img.shields.io/github/languages/code-size/IndrajeetPatil/statsExpressions.svg)](https://github.com/IndrajeetPatil/statsExpressions) | [![Coverage Status](https://coveralls.io/repos/github/IndrajeetPatil/statsExpressions/badge.svg?branch=master)](https://coveralls.io/github/IndrajeetPatil/statsExpressions?branch=master) | [![Total downloads badge](https://cranlogs.r-pkg.org/badges/grand-total/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![Github Stars](https://img.shields.io/github/stars/IndrajeetPatil/statsExpressions.svg?style=social&label=Github)](https://github.com/IndrajeetPatil/statsExpressions) | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.2074621.svg)](https://doi.org/10.5281/zenodo.3386122) [![Licence](https://img.shields.io/badge/licence-GPL--3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.en.html) | [![Codecov test coverage](https://codecov.io/gh/IndrajeetPatil/statsExpressions/branch/master/graph/badge.svg)](https://codecov.io/gh/IndrajeetPatil/statsExpressions?branch=master) | [![HitCount](http://hits.dwyl.io/IndrajeetPatil/statsExpressions.svg)](http://hits.dwyl.io/IndrajeetPatil/statsExpressions) | [![Last-changedate](https://img.shields.io/badge/last%20change-`r gsub('-', '--', Sys.Date())`-yellowgreen.svg)](https://github.com/IndrajeetPatil/statsExpressions/commits/master) | [![GitHub last commit](https://img.shields.io/github/last-commit/IndrajeetPatil/statsExpressions.svg)](https://github.com/IndrajeetPatil/statsExpressions/commits/master) -[![status](https://tinyverse.netlify.com/badge/statsExpressions)](https://CRAN.R-project.org/package=statsExpressions) | [![Covrpage Summary](https://img.shields.io/badge/covrpage-Last_Build_2020_01_15-yellowgreen.svg)](https://github.com/IndrajeetPatil/statsExpressions/blob/master/tests/README.md) | [![Gitter chat](https://badges.gitter.im/gitterHQ/gitter.png)](https://gitter.im/statsExpressions/community) | [![Project Status](http://www.repostatus.org/badges/latest/active.svg)](http://www.repostatus.org/#active) | [![contributions welcome](https://img.shields.io/badge/contributions-welcome-brightgreen.svg?style=flat)](https://github.com/IndrajeetPatil/statsExpressions/issues) +[![status](https://tinyverse.netlify.com/badge/statsExpressions)](https://CRAN.R-project.org/package=statsExpressions) | [![Covrpage Summary](https://img.shields.io/badge/covrpage-Last_Build_2020_01_22-yellowgreen.svg)](https://github.com/IndrajeetPatil/statsExpressions/blob/master/tests/README.md) | [![Gitter chat](https://badges.gitter.im/gitterHQ/gitter.png)](https://gitter.im/statsExpressions/community) | [![Project Status](http://www.repostatus.org/badges/latest/active.svg)](http://www.repostatus.org/#active) | [![contributions welcome](https://img.shields.io/badge/contributions-welcome-brightgreen.svg?style=flat)](https://github.com/IndrajeetPatil/statsExpressions/issues) # Introduction @@ -43,14 +43,14 @@ create these expressions. # Installation -To get the latest, stable `CRAN` release (`0.2.0`): +To get the latest, stable `CRAN` release (`0.2.1`): ```{r installationCRAN, eval = FALSE} install.packages(pkgs = "statsExpressions") ``` You can get the **development** version of the package from `GitHub` -(`0.2.0.9000`). To see what new changes (and bug fixes) have been made to the +(`0.2.1.9000`). To see what new changes (and bug fixes) have been made to the package since the last release on `CRAN`, you can check the detailed log of changes here: diff --git a/README.md b/README.md index c0113acd..d1fb15bb 100644 --- a/README.md +++ b/README.md @@ -5,12 +5,12 @@ | Package | Status | Usage | GitHub | References | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | ----------------------------------------------------------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | -| [![CRAN\_Release\_Badge](http://www.r-pkg.org/badges/version-ago/statsExpressions)](https://CRAN.R-project.org/package=statsExpressions) | [![Build Status](https://travis-ci.org/IndrajeetPatil/statsExpressions.svg?branch=master)](https://travis-ci.org/IndrajeetPatil/statsExpressions) | [![Daily downloads badge](https://cranlogs.r-pkg.org/badges/last-day/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![GitHub version](https://img.shields.io/badge/GitHub-0.2.0.9000-orange.svg?style=flat-square)](https://github.com/IndrajeetPatil/statsExpressions/) | [![Website](https://img.shields.io/badge/website-statsExpressions-orange.svg?colorB=E91E63)](https://indrajeetpatil.github.io/statsExpressions/) | -| [![CRAN Checks](https://cranchecks.info/badges/summary/statsExpressions)](https://cran.r-project.org/web/checks/check_results_statsExpressions.html) | [![AppVeyor Build Status](https://ci.appveyor.com/api/projects/status/github/IndrajeetPatil/statsExpressions?branch=master&svg=true)](https://ci.appveyor.com/project/IndrajeetPatil/statsExpressions) | [![Weekly downloads badge](https://cranlogs.r-pkg.org/badges/last-week/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![Forks](https://img.shields.io/badge/forks-1-blue.svg)](https://github.com/IndrajeetPatil/statsExpressions/) | [![Rdoc](https://www.rdocumentation.org/badges/version/statsExpressions)](https://www.rdocumentation.org/packages/statsExpressions) | -| [![minimal R version](https://img.shields.io/badge/R%3E%3D-3.5.0-6666ff.svg)](https://cran.r-project.org/) | [![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/) | [![Monthly downloads badge](https://cranlogs.r-pkg.org/badges/last-month/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![Github Issues](https://img.shields.io/badge/issues-5-red.svg)](https://github.com/IndrajeetPatil/statsExpressions/issues) | [![vignettes](https://img.shields.io/badge/vignettes-0.2.0-orange.svg?colorB=FF5722)](https://CRAN.R-project.org/package=statsExpressions/vignettes/) | +| [![CRAN\_Release\_Badge](http://www.r-pkg.org/badges/version-ago/statsExpressions)](https://CRAN.R-project.org/package=statsExpressions) | [![Build Status](https://travis-ci.org/IndrajeetPatil/statsExpressions.svg?branch=master)](https://travis-ci.org/IndrajeetPatil/statsExpressions) | [![Daily downloads badge](https://cranlogs.r-pkg.org/badges/last-day/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![GitHub version](https://img.shields.io/badge/GitHub-0.2.1.9000-orange.svg?style=flat-square)](https://github.com/IndrajeetPatil/statsExpressions/) | [![Website](https://img.shields.io/badge/website-statsExpressions-orange.svg?colorB=E91E63)](https://indrajeetpatil.github.io/statsExpressions/) | +| [![CRAN Checks](https://cranchecks.info/badges/summary/statsExpressions)](https://cran.r-project.org/web/checks/check_results_statsExpressions.html) | [![AppVeyor Build Status](https://ci.appveyor.com/api/projects/status/github/IndrajeetPatil/statsExpressions?branch=master&svg=true)](https://ci.appveyor.com/project/IndrajeetPatil/statsExpressions) | [![Weekly downloads badge](https://cranlogs.r-pkg.org/badges/last-week/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![Forks](https://img.shields.io/badge/forks-2-blue.svg)](https://github.com/IndrajeetPatil/statsExpressions/) | [![Rdoc](https://www.rdocumentation.org/badges/version/statsExpressions)](https://www.rdocumentation.org/packages/statsExpressions) | +| [![minimal R version](https://img.shields.io/badge/R%3E%3D-3.5.0-6666ff.svg)](https://cran.r-project.org/) | [![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/) | [![Monthly downloads badge](https://cranlogs.r-pkg.org/badges/last-month/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![Github Issues](https://img.shields.io/badge/issues-5-red.svg)](https://github.com/IndrajeetPatil/statsExpressions/issues) | [![vignettes](https://img.shields.io/badge/vignettes-0.2.1-orange.svg?colorB=FF5722)](https://CRAN.R-project.org/package=statsExpressions/vignettes/) | | [![GitHub code size in bytes](https://img.shields.io/github/languages/code-size/IndrajeetPatil/statsExpressions.svg)](https://github.com/IndrajeetPatil/statsExpressions) | [![Coverage Status](https://coveralls.io/repos/github/IndrajeetPatil/statsExpressions/badge.svg?branch=master)](https://coveralls.io/github/IndrajeetPatil/statsExpressions?branch=master) | [![Total downloads badge](https://cranlogs.r-pkg.org/badges/grand-total/statsExpressions?color=blue)](https://CRAN.R-project.org/package=statsExpressions) | [![Github Stars](https://img.shields.io/github/stars/IndrajeetPatil/statsExpressions.svg?style=social&label=Github)](https://github.com/IndrajeetPatil/statsExpressions) | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.2074621.svg)](https://doi.org/10.5281/zenodo.3386122) | -| [![Licence](https://img.shields.io/badge/licence-GPL--3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.en.html) | [![Codecov test 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chat](https://badges.gitter.im/gitterHQ/gitter.png)](https://gitter.im/statsExpressions/community) | [![Project Status](http://www.repostatus.org/badges/latest/active.svg)](http://www.repostatus.org/#active) | [![contributions welcome](https://img.shields.io/badge/contributions-welcome-brightgreen.svg?style=flat)](https://github.com/IndrajeetPatil/statsExpressions/issues) | +| [![Licence](https://img.shields.io/badge/licence-GPL--3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.en.html) | [![Codecov test coverage](https://codecov.io/gh/IndrajeetPatil/statsExpressions/branch/master/graph/badge.svg)](https://codecov.io/gh/IndrajeetPatil/statsExpressions?branch=master) | [![HitCount](http://hits.dwyl.io/IndrajeetPatil/statsExpressions.svg)](http://hits.dwyl.io/IndrajeetPatil/statsExpressions) | [![Last-changedate](https://img.shields.io/badge/last%20change-2020--01--22-yellowgreen.svg)](https://github.com/IndrajeetPatil/statsExpressions/commits/master) | [![GitHub last commit](https://img.shields.io/github/last-commit/IndrajeetPatil/statsExpressions.svg)](https://github.com/IndrajeetPatil/statsExpressions/commits/master) | +| [![status](https://tinyverse.netlify.com/badge/statsExpressions)](https://CRAN.R-project.org/package=statsExpressions) | [![Covrpage Summary](https://img.shields.io/badge/covrpage-Last_Build_2020_01_22-yellowgreen.svg)](https://github.com/IndrajeetPatil/statsExpressions/blob/master/tests/README.md) | [![Gitter chat](https://badges.gitter.im/gitterHQ/gitter.png)](https://gitter.im/statsExpressions/community) | [![Project Status](http://www.repostatus.org/badges/latest/active.svg)](http://www.repostatus.org/#active) | [![contributions welcome](https://img.shields.io/badge/contributions-welcome-brightgreen.svg?style=flat)](https://github.com/IndrajeetPatil/statsExpressions/issues) | # Introduction @@ -23,14 +23,14 @@ functions needed to create these expressions. # Installation -To get the latest, stable `CRAN` release (`0.2.0`): +To get the latest, stable `CRAN` release (`0.2.1`): ``` r install.packages(pkgs = "statsExpressions") ``` You can get the **development** version of the package from `GitHub` -(`0.2.0.9000`). To see what new changes (and bug fixes) have been made +(`0.2.1.9000`). To see what new changes (and bug fixes) have been made to the package since the last release on `CRAN`, you can check the detailed log of changes here: diff --git a/codemeta.json b/codemeta.json index 2b62fab3..a67eb503 100644 --- a/codemeta.json +++ b/codemeta.json @@ -16,7 +16,7 @@ ], "issueTracker": "\n https://github.com/IndrajeetPatil/statsExpressions/issues", "license": "https://spdx.org/licenses/GPL-3.0", - "version": "0.2.0.9000", + "version": "0.2.1", "programmingLanguage": { "@type": "ComputerLanguage", "name": "R", @@ -211,7 +211,7 @@ "@type": "SoftwareApplication", "identifier": "groupedstats", "name": "groupedstats", - "version": ">= 0.1.0", + "version": ">= 0.1.1", "provider": { "@id": "https://cran.r-project.org", "@type": "Organization", diff --git a/docs/404.html b/docs/404.html index e02c4eeb..a4d8b628 100644 --- a/docs/404.html +++ b/docs/404.html @@ -75,7 +75,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/CODE_OF_CONDUCT.html b/docs/CODE_OF_CONDUCT.html index cbdb587a..5f726ef0 100644 --- a/docs/CODE_OF_CONDUCT.html +++ b/docs/CODE_OF_CONDUCT.html @@ -75,7 +75,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/CONTRIBUTING.html b/docs/CONTRIBUTING.html index feaeb2a8..c23ca6ea 100644 --- a/docs/CONTRIBUTING.html +++ b/docs/CONTRIBUTING.html @@ -75,7 +75,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html index 7a7f3397..7b32b58a 100644 --- a/docs/LICENSE-text.html +++ b/docs/LICENSE-text.html @@ -75,7 +75,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/LICENSE.html b/docs/LICENSE.html index de2f8447..7ec68b70 100644 --- a/docs/LICENSE.html +++ b/docs/LICENSE.html @@ -75,7 +75,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/SUPPORT.html b/docs/SUPPORT.html index d5cfb3c5..d5391e35 100644 --- a/docs/SUPPORT.html +++ b/docs/SUPPORT.html @@ -75,7 +75,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/articles/index.html b/docs/articles/index.html index 11cd47d9..383edd24 100644 --- a/docs/articles/index.html +++ b/docs/articles/index.html @@ -75,7 +75,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/articles/stats_details.html b/docs/articles/stats_details.html index 2685e051..8f66ef2f 100644 --- a/docs/articles/stats_details.html +++ b/docs/articles/stats_details.html @@ -34,7 +34,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 @@ -91,13 +91,13 @@ -
+

Test and effect size details

Indrajeet Patil

-

2020-01-15

+

2020-01-22

Source: vignettes/stats_details.Rmd diff --git a/docs/articles/stats_details_files/header-attrs-2.1/header-attrs.js b/docs/articles/stats_details_files/header-attrs-2.1/header-attrs.js new file mode 100644 index 00000000..dd57d92e --- /dev/null +++ b/docs/articles/stats_details_files/header-attrs-2.1/header-attrs.js @@ -0,0 +1,12 @@ +// Pandoc 2.9 adds attributes on both header and div. We remove the former (to +// be compatible with the behavior of Pandoc < 2.8). +document.addEventListener('DOMContentLoaded', function(e) { + var hs = document.querySelectorAll("div.section[class*='level'] > :first-child"); + var i, h, a; + for (i = 0; i < hs.length; i++) { + h = hs[i]; + if (!/^h[1-6]$/i.test(h.tagName)) continue; // it should be a header h1-h6 + a = h.attributes; + while (a.length > 0) h.removeAttribute(a[0].name); + } +}); diff --git a/docs/articles/tests_and_coverage.html b/docs/articles/tests_and_coverage.html index 5dfc0e1c..47bf9800 100644 --- a/docs/articles/tests_and_coverage.html +++ b/docs/articles/tests_and_coverage.html @@ -34,7 +34,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1
@@ -91,12 +91,12 @@ -
+

Tests and Coverage

-

15 January, 2020 23:51:40

+

22 January, 2020 14:02:30

Source: vignettes/tests_and_coverage.Rmd @@ -126,43 +126,43 @@

99.54 -R/helpers_anova_expressions.R +R/helpers_anova_expressions.R 97.17 -R/helpers_bf_tests.R +R/helpers_bf_tests.R 100.00 -R/helpers_contingency_tabs_expressions.R +R/helpers_contingency_tabs_expressions.R 100.00 -R/helpers_corr_test_expressions.R +R/helpers_corr_test_expressions.R 100.00 -R/helpers_effsize_ci.R +R/helpers_effsize_ci.R 100.00 -R/helpers_messages.R +R/helpers_messages.R 100.00 -R/helpers_meta_analysis_expressions.R +R/helpers_meta_analysis_expressions.R 100.00 -R/helpers_miscellaneous.R +R/helpers_miscellaneous.R 100.00 -R/helpers_t_onesample_expressions.R +R/helpers_t_onesample_expressions.R 100.00 -R/helpers_t_test_expressions.R +R/helpers_t_test_expressions.R 100.00 @@ -186,9 +186,9 @@

-test-effsize_helpers.R +test-effsize_helpers.R 147 -4.89 +3.64 0 0 0 @@ -196,9 +196,9 @@

-test-expr_anova_bayes.R +test-expr_anova_bayes.R 3 -3.03 +4.11 0 0 0 @@ -206,9 +206,9 @@

-test-expr_anova_nonparametric.R +test-expr_anova_nonparametric.R 4 -1.07 +1.62 0 0 0 @@ -216,9 +216,9 @@

-test-expr_anova_parametric.R +test-expr_anova_parametric.R 11 -2.72 +2.83 0 0 1 @@ -226,9 +226,9 @@

+ -test-expr_anova_robust.R +test-expr_anova_robust.R 4 -2.71 +2.78 0 0 0 @@ -236,9 +236,9 @@

-test-expr_contingency_tab.R +test-expr_contingency_tab.R 14 -1.85 +1.62 0 0 0 @@ -246,9 +246,9 @@

-test-expr_corr_test.R +test-expr_corr_test.R 4 -0.13 +0.11 0 0 0 @@ -256,9 +256,9 @@

-test-expr_meta_parametric.R +test-expr_meta_parametric.R 14 -0.13 +0.12 0 0 0 @@ -266,9 +266,9 @@

-test-expr_meta_robust.R +test-expr_meta_robust.R 1 -0.44 +0.22 0 0 0 @@ -276,7 +276,7 @@

-test-expr_t_bayes.R +test-expr_t_bayes.R 4 0.14 0 @@ -286,9 +286,9 @@

-test-expr_t_nonparametric.R +test-expr_t_nonparametric.R 3 -0.23 +0.24 0 0 0 @@ -296,7 +296,7 @@

-test-expr_t_onesample.R +test-expr_t_onesample.R 7 0.17 0 @@ -306,9 +306,9 @@

-test-expr_t_parametric.R +test-expr_t_parametric.R 4 -0.09 +0.08 0 0 0 @@ -316,9 +316,9 @@

-test-expr_t_robust.R +test-expr_t_robust.R 5 -5.66 +6.14 0 0 0 @@ -326,7 +326,7 @@

-test-expr_templates.R +test-expr_templates.R 3 0.02 0 @@ -336,9 +336,9 @@

-test-helpers_bf_tests.R +test-helpers_bf_tests.R 63 -24.32 +28.55 0 0 0 @@ -346,7 +346,7 @@

-test-subtitle_misc_helpers.R +test-subtitle_misc_helpers.R 4 0.06 0 @@ -356,9 +356,9 @@

-test-switch_statements.R +test-switch_statements.R 21 -0.03 +0.04 0 0 0 @@ -389,43 +389,43 @@

-test-effsize_helpers.R +test-effsize_helpers.R effsize_t_parametric effsize works for Cohen’s d and Hedge’s g (between - without NA) PASS 29 -0.36 +0.07 -test-effsize_helpers.R +test-effsize_helpers.R effsize_t_parametric effsize works for Cohen’s d and Hedge’s g (between - with NA) PASS 24 -0.05 +0.07 -test-effsize_helpers.R +test-effsize_helpers.R effsize_t_parametric effsize works for Cohen’s d and Hedge’s g (within - without NA) PASS 26 -0.04 +0.03 -test-effsize_helpers.R +test-effsize_helpers.R effsize_t_parametric effsize works for Cohen’s d and Hedge’s g (within - with NA) PASS 23 -0.07 +0.05 -test-effsize_helpers.R +test-effsize_helpers.R effsize_t_parametric effsize works for one sample test PASS @@ -434,151 +434,151 @@

-test-effsize_helpers.R +test-effsize_helpers.R t1way_ci t1way_ci works PASS 10 -3.38 +2.64 -test-effsize_helpers.R +test-effsize_helpers.R test_yuend_ci Yuen’s test on trimmed means for dependent samples works PASS 12 -0.71 +0.56 -test-effsize_helpers.R +test-effsize_helpers.R robcor_ci robcor_ci works PASS 9 -0.27 +0.21 -test-expr_anova_bayes.R +test-expr_anova_bayes.R expr_anova_bayes expr_anova_bayes works (between-subjects) PASS 1 -0.06 +0.20 -test-expr_anova_bayes.R +test-expr_anova_bayes.R expr_anova_bayes expr_anova_bayes works (within-subjects) PASS 1 -0.28 +0.33 -test-expr_anova_bayes.R +test-expr_anova_bayes.R expr_anova_bayes expr_anova_bayes works (within-subjects) - with NA PASS 1 -2.69 +3.58 -test-expr_anova_nonparametric.R +test-expr_anova_nonparametric.R expr_anova_nonparametric between-subjects - data with and without NAs PASS 2 -0.41 +0.68 -test-expr_anova_nonparametric.R +test-expr_anova_nonparametric.R expr_anova_nonparametric within-subjects - data with and without NAs PASS 2 -0.66 +0.94 -test-expr_anova_parametric.R +test-expr_anova_parametric.R expr_anova_parametric - between-subjects parametric anova subtitles work (without NAs) PASS 1 -0.05 +0.06 -test-expr_anova_parametric.R +test-expr_anova_parametric.R expr_anova_parametric - between-subjects parametric anova subtitles work (with NAs) PASS 1 -0.76 +0.94 -test-expr_anova_parametric.R +test-expr_anova_parametric.R expr_anova_parametric - between-subjects parametric anova subtitles with partial omega-squared PASS 1 -0.16 +0.18 -test-expr_anova_parametric.R +test-expr_anova_parametric.R expr_anova_parametric - between-subjects parametric anova subtitles with partial eta-squared and data with NAs PASS 1 -0.05 +0.08 -test-expr_anova_parametric.R +test-expr_anova_parametric.R expr_anova_parametric - between-subjects parametric anova subtitles with partial eta-squared and data with NAs PASS 2 -0.14 +0.17 -test-expr_anova_parametric.R +test-expr_anova_parametric.R expr_anova_parametric - between-subjects parametric anova subtitles work (without NAs) PASS 1 -0.59 +0.61 -test-expr_anova_parametric.R +test-expr_anova_parametric.R expr_anova_parametric - between-subjects parametric anova subtitles work (with NAs) PASS 2 -0.33 +0.27 -test-expr_anova_parametric.R +test-expr_anova_parametric.R expr_anova_parametric - between-subjects parametric anova subtitles work (catch bad data) PASS 1 -0.64 +0.52 -test-expr_anova_parametric.R +test-expr_anova_parametric.R expr_anova_parametric - between-subjects checking warning message when too few obs SKIPPED @@ -587,52 +587,52 @@

+ -test-expr_anova_robust.R +test-expr_anova_robust.R expr_anova_robust expr_anova_robust works - between-subjects PASS 2 -2.64 +2.67 -test-expr_anova_robust.R +test-expr_anova_robust.R expr_anova_robust expr_anova_robust works - within-subjects PASS 2 -0.07 +0.11 -test-expr_contingency_tab.R +test-expr_contingency_tab.R expr_contingency_tab expr_contingency_tab works - data without NAs PASS 2 -0.60 +0.56 -test-expr_contingency_tab.R +test-expr_contingency_tab.R expr_contingency_tab expr_contingency_tab works - data with NAs PASS 1 -0.09 +0.05 -test-expr_contingency_tab.R +test-expr_contingency_tab.R expr_contingency_tab paired expr_contingency_tab works - counts data without NAs PASS 1 -0.31 +0.18 -test-expr_contingency_tab.R +test-expr_contingency_tab.R expr_contingency_tab paired expr_contingency_tab works - with NAs PASS @@ -641,52 +641,52 @@

-test-expr_contingency_tab.R +test-expr_contingency_tab.R expr_contingency_tab paired data 4-by-4 PASS 2 -0.17 +0.15 -test-expr_contingency_tab.R +test-expr_contingency_tab.R expr_contingency_tab Goodness of Fit expr_contingency_tab works without counts PASS 2 -0.15 +0.16 -test-expr_contingency_tab.R +test-expr_contingency_tab.R expr_contingency_tab Goodness of Fit expr_contingency_tab works with counts PASS 1 -0.10 +0.09 -test-expr_contingency_tab.R +test-expr_contingency_tab.R expr_contingency_tab works with dataframes with NAs and with ratio PASS 1 -0.04 +0.07 -test-expr_contingency_tab.R +test-expr_contingency_tab.R expr_contingency_tab works even in edge cases PASS 3 -0.21 +0.18 -test-expr_corr_test.R +test-expr_corr_test.R expr_corr_test expr_corr_test works - nonparametric PASS @@ -695,7 +695,7 @@

-test-expr_corr_test.R +test-expr_corr_test.R expr_corr_test expr_corr_test works - parametric PASS @@ -704,16 +704,16 @@

-test-expr_corr_test.R +test-expr_corr_test.R expr_corr_test expr_corr_test works - robust PASS 1 -0.05 +0.03 -test-expr_corr_test.R +test-expr_corr_test.R expr_corr_test expr_corr_test works - bayes PASS @@ -722,16 +722,16 @@

-test-expr_meta_parametric.R +test-expr_meta_parametric.R expr_meta_parametric expr_meta_parametric works PASS 13 -0.10 +0.09 -test-expr_meta_parametric.R +test-expr_meta_parametric.R expr_meta_parametric checking meta-analysis results object PASS @@ -740,16 +740,16 @@

-test-expr_meta_robust.R +test-expr_meta_robust.R expr_meta_robust expr_meta_robust works PASS 1 -0.44 +0.22 -test-expr_t_bayes.R +test-expr_t_bayes.R expr_t_bayes expr_t_bayes works - between-subjects design PASS @@ -758,7 +758,7 @@

-test-expr_t_bayes.R +test-expr_t_bayes.R expr_t_bayes expr_t_bayes works - between-subjects design - with NA PASS @@ -767,7 +767,7 @@

-test-expr_t_bayes.R +test-expr_t_bayes.R expr_t_bayes expr_t_bayes_paired works - within-subjects design PASS @@ -776,7 +776,7 @@

-test-expr_t_bayes.R +test-expr_t_bayes.R expr_t_bayes expr_t_bayes_paired works - within-subjects design - with NA PASS @@ -785,43 +785,43 @@

-test-expr_t_nonparametric.R +test-expr_t_nonparametric.R expr_t_nonparametric expr_t_nonparametric works - between-subjects design PASS 1 -0.15 +0.11 -test-expr_t_nonparametric.R +test-expr_t_nonparametric.R expr_t_nonparametric expr_t_nonparametric works - within-subjects design PASS 2 -0.08 +0.13 -test-expr_t_onesample.R +test-expr_t_onesample.R expr_t_onesample expr_t_onesample parametric works PASS 4 -0.05 +0.04 -test-expr_t_onesample.R +test-expr_t_onesample.R expr_t_onesample expr_t_onesample non-parametric works PASS 1 -0.06 +0.07 -test-expr_t_onesample.R +test-expr_t_onesample.R expr_t_onesample expr_t_onesample robust works PASS @@ -830,7 +830,7 @@

-test-expr_t_onesample.R +test-expr_t_onesample.R expr_t_onesample expr_t_onesample bayes factor works PASS @@ -839,25 +839,25 @@

-test-expr_t_parametric.R +test-expr_t_parametric.R expr_t_parametric parametric t-test works (between-subjects without NAs) PASS 1 -0.02 +0.01 -test-expr_t_parametric.R +test-expr_t_parametric.R expr_t_parametric parametric t-test works (between-subjects with NAs) PASS 1 -0.01 +0.02 -test-expr_t_parametric.R +test-expr_t_parametric.R expr_t_parametric parametric t-test works (within-subjects without NAs) PASS @@ -866,52 +866,52 @@

-test-expr_t_parametric.R +test-expr_t_parametric.R expr_t_parametric parametric t-test works (within-subjects with NAs) PASS 1 -0.03 +0.02 -test-expr_t_robust.R +test-expr_t_robust.R expr_t_robust expr_t_robust - within-subjects - without NAs PASS 2 -3.36 +2.81 -test-expr_t_robust.R +test-expr_t_robust.R expr_t_robust expr_t_robust - within-subjects - with NAs PASS 1 -1.14 +1.90 -test-expr_t_robust.R +test-expr_t_robust.R expr_t_robust expr_t_robust - between-subjects - without NAs PASS 1 -0.61 +0.70 -test-expr_t_robust.R +test-expr_t_robust.R expr_t_robust expr_t_robust - between-subjects - with NAs PASS 1 -0.55 +0.73 -test-expr_templates.R +test-expr_templates.R expr_templates checking if subtitle template works without any parameter PASS @@ -920,124 +920,124 @@

-test-expr_templates.R +test-expr_templates.R expr_templates checking if subtitle template works with a single parameter PASS 1 -0.00 +0.02 -test-expr_templates.R +test-expr_templates.R expr_templates checking if subtitle template works with two parameters PASS 1 -0.02 +0.00 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor (correlation) PASS 5 -0.01 +0.00 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor (independent samples t-test) PASS 6 -0.05 +0.07 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor (paired t-test) PASS 7 -0.06 +0.12 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor (one sample t-test) PASS 7 -0.03 +0.05 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor (between-subjects - anova) PASS 9 -0.13 +0.17 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor (within-subjects - anova) PASS 9 -0.98 +1.17 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor (proportion test) PASS 6 -3.94 +4.89 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor (contingency tab) PASS 10 -0.09 +0.13 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor caption maker check PASS 1 -0.02 +0.00 -test-helpers_bf_tests.R +test-helpers_bf_tests.R helpers_bf_tests bayes factor caption maker check PASS 2 -0.00 +0.01 -test-helpers_bf_tests.R +test-helpers_bf_tests.R bf_meta bf_meta works PASS 1 -19.01 +21.94 -test-subtitle_misc_helpers.R +test-subtitle_misc_helpers.R long_to_wide_converter long_to_wide_converter works PASS @@ -1046,16 +1046,16 @@

-test-switch_statements.R +test-switch_statements.R switch statements switch for effct size type works PASS 14 -0.01 +0.02 -test-switch_statements.R +test-switch_statements.R switch statements switch for stats type works PASS diff --git a/docs/articles/tests_and_coverage_files/header-attrs-2.1/header-attrs.js b/docs/articles/tests_and_coverage_files/header-attrs-2.1/header-attrs.js new file mode 100644 index 00000000..dd57d92e --- /dev/null +++ b/docs/articles/tests_and_coverage_files/header-attrs-2.1/header-attrs.js @@ -0,0 +1,12 @@ +// Pandoc 2.9 adds attributes on both header and div. We remove the former (to +// be compatible with the behavior of Pandoc < 2.8). +document.addEventListener('DOMContentLoaded', function(e) { + var hs = document.querySelectorAll("div.section[class*='level'] > :first-child"); + var i, h, a; + for (i = 0; i < hs.length; i++) { + h = hs[i]; + if (!/^h[1-6]$/i.test(h.tagName)) continue; // it should be a header h1-h6 + a = h.attributes; + while (a.length > 0) h.removeAttribute(a[0].name); + } +}); diff --git a/docs/authors.html b/docs/authors.html index 06ece2e5..05223253 100644 --- a/docs/authors.html +++ b/docs/authors.html @@ -75,7 +75,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1

diff --git a/docs/index.html b/docs/index.html index 737a2043..a1fb279f 100644 --- a/docs/index.html +++ b/docs/index.html @@ -38,7 +38,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1
@@ -121,14 +121,14 @@ CRAN_Release_Badge Build Status Daily downloads badge -GitHub version +GitHub version Website CRAN Checks AppVeyor Build Status Weekly downloads badge -Forks +Forks Rdoc @@ -136,7 +136,7 @@ lifecycle Monthly downloads badge Github Issues -vignettes +vignettes GitHub code size in bytes @@ -149,12 +149,12 @@ Licence Codecov test coverage HitCount -Last-changedate +Last-changedate GitHub last commit status -Covrpage Summary +Covrpage Summary Gitter chat Project Status contributions welcome @@ -170,9 +170,9 @@

Installation

-

To get the latest, stable CRAN release (0.2.0):

+

To get the latest, stable CRAN release (0.2.1):

install.packages(pkgs = "statsExpressions")
-

You can get the development version of the package from GitHub (0.2.0.9000). To see what new changes (and bug fixes) have been made to the package since the last release on CRAN, you can check the detailed log of changes here: https://indrajeetpatil.github.io/statsExpressions/news/index.html

+

You can get the development version of the package from GitHub (0.2.1.9000). To see what new changes (and bug fixes) have been made to the package since the last release on CRAN, you can check the detailed log of changes here: https://indrajeetpatil.github.io/statsExpressions/news/index.html

If you are in hurry and want to reduce the time of installation, prefer-

# needed package to download from GitHub repo
 utils::install.packages(pkgs = "remotes")
diff --git a/docs/news/index.html b/docs/news/index.html
index 463b2044..a00b50b3 100644
--- a/docs/news/index.html
+++ b/docs/news/index.html
@@ -75,7 +75,7 @@
       
       
         statsExpressions
-        0.2.0.9000
+        0.2.1
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml index 20aa645e..5e199963 100644 --- a/docs/pkgdown.yml +++ b/docs/pkgdown.yml @@ -1,6 +1,6 @@ pandoc: '2.9' pkgdown: 1.4.1.9000 -pkgdown_sha: 24ef1bbdec0de44fe11eb1d58b40dba961525d43 +pkgdown_sha: 134033d9d744c548c6fbe297bc0fbd1a2f498e83 articles: stats_details: stats_details.html tests_and_coverage: tests_and_coverage.html diff --git a/docs/reference/Titanic_full.html b/docs/reference/Titanic_full.html index f378fe46..78467b26 100644 --- a/docs/reference/Titanic_full.html +++ b/docs/reference/Titanic_full.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1
@@ -169,21 +169,21 @@

Details

This is a modified dataset from datasets package.

Examples

- 
dim(Titanic_full)
#> [1] 2201    5
head(Titanic_full)
#> # A tibble: 6 x 5
+    
dim(Titanic_full)
#> [1] 2201    5
head(Titanic_full)
#> # A tibble: 6 x 5
 #>      id Class Sex   Age   Survived
-#>   <dbl> <fct> <fct> <fct> <fct>   
-#> 1     1 3rd   Male  Child No      
-#> 2     2 3rd   Male  Child No      
-#> 3     3 3rd   Male  Child No      
-#> 4     4 3rd   Male  Child No      
-#> 5     5 3rd   Male  Child No      
-#> 6     6 3rd   Male  Child No      
dplyr::glimpse(Titanic_full)
#> Observations: 2,201
+#>   <dbl> <fct> <fct> <fct> <fct>   
+#> 1     1 3rd   Male  Child No      
+#> 2     2 3rd   Male  Child No      
+#> 3     3 3rd   Male  Child No      
+#> 4     4 3rd   Male  Child No      
+#> 5     5 3rd   Male  Child No      
+#> 6     6 3rd   Male  Child No      
dplyr::glimpse(Titanic_full)
#> Observations: 2,201
 #> Variables: 5
-#> $ id       <dbl> 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,...
-#> $ Class    <fct> 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd...
-#> $ Sex      <fct> Male, Male, Male, Male, Male, Male, Male, Male, Male, Male...
-#> $ Age      <fct> Child, Child, Child, Child, Child, Child, Child, Child, Ch...
-#> $ Survived <fct> No, No, No, No, No, No, No, No, No, No, No, No, No, No, No...

+#> $ id       <dbl> 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,...
+#> $ Class    <fct> 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd, 3rd...
+#> $ Sex      <fct> Male, Male, Male, Male, Male, Male, Male, Male, Male, Male...
+#> $ Age      <fct> Child, Child, Child, Child, Child, Child, Child, Child, Ch...
+#> $ Survived <fct> No, No, No, No, No, No, No, No, No, No, No, No, No, No, No...

@@ -176,20 +176,20 @@

Details while reading them in text versus experiencing them in virtual reality.

Examples

- 
dim(VR_dilemma)
#> [1] 68  4
head(VR_dilemma)
#> # A tibble: 6 x 4
+    
dim(VR_dilemma)
#> [1] 68  4
head(VR_dilemma)
#> # A tibble: 6 x 4
 #>      id order modality score
-#>   <dbl> <chr> <chr>    <dbl>
-#> 1     1 0     text      0.25
-#> 2     6 0     text      1   
-#> 3     7 0     text      1   
-#> 4     8 0     text      1   
-#> 5     9 0     text      0.5 
-#> 6    10 0     text      0.75
dplyr::glimpse(VR_dilemma)
#> Observations: 68
+#>   <dbl> <chr> <chr>    <dbl>
+#> 1     1 0     text      0.25
+#> 2     6 0     text      1   
+#> 3     7 0     text      1   
+#> 4     8 0     text      1   
+#> 5     9 0     text      0.5 
+#> 6    10 0     text      0.75
dplyr::glimpse(VR_dilemma)
#> Observations: 68
 #> Variables: 4
-#> $ id       <dbl> 1, 6, 7, 8, 9, 10, 12, 14, 15, 17, 20, 22, 28, 31, 34, 35,...
-#> $ order    <chr> "0", "0", "0", "0", "0", "0", "0", "0", "0", "0", "0", "0"...
-#> $ modality <chr> "text", "text", "text", "text", "text", "text", "text", "t...
-#> $ score    <dbl> 0.25, 1.00, 1.00, 1.00, 0.50, 0.75, 1.00, 1.00, 0.75, 0.00...

+#> $ id       <dbl> 1, 6, 7, 8, 9, 10, 12, 14, 15, 17, 20, 22, 28, 31, 34, 35,...
+#> $ order    <chr> "0", "0", "0", "0", "0", "0", "0", "0", "0", "0", "0", "0"...
+#> $ modality <chr> "text", "text", "text", "text", "text", "text", "text", "t...
+#> $ score    <dbl> 0.25, 1.00, 1.00, 1.00, 0.50, 0.75, 1.00, 1.00, 0.75, 0.00...
diff --git a/docs/reference/bf_corr_test.html b/docs/reference/bf_corr_test.html index 3b695deb..e59fe6d5 100644 --- a/docs/reference/bf_corr_test.html +++ b/docs/reference/bf_corr_test.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1
@@ -232,10 +232,10 @@

Examp y = y4, bf.prior = 0.8, output = "results" -)

#> # A tibble: 1 x 8 +)
#> # A tibble: 1 x 8 #> bf10 error bf01 log_e_bf10 log_e_bf01 log_10_bf10 log_10_bf01 bf.prior -#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 0.607 0 1.65 -0.499 0.499 -0.217 0.217 0.8
# } +#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 0.607 0 1.65 -0.499 0.499 -0.217 0.217 0.8
# }
diff --git a/docs/reference/bf_extractor.html b/docs/reference/bf_extractor.html index 3cc31484..a2583280 100644 --- a/docs/reference/bf_extractor.html +++ b/docs/reference/bf_extractor.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 @@ -170,10 +170,10 @@

Examp data = iris, progress = FALSE ) -)
#> # A tibble: 1 x 7 +)
#> # A tibble: 1 x 7 #> bf10 error bf01 log_e_bf10 log_e_bf01 log_10_bf10 log_10_bf01 -#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 1.43e28 0.0000000651 7.02e-29 64.8 -64.8 28.2 -28.2
+#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 1.43e28 0.0000000651 7.02e-29 64.8 -64.8 28.2 -28.2 @@ -256,14 +256,14 @@

Examp ), row.names = c(NA, -5L), class = c("tbl_df", "tbl", "data.frame") - ))
#> # A tibble: 5 x 3 + ))
#> # A tibble: 5 x 3 #> study estimate std.error -#> <chr> <dbl> <dbl> -#> 1 1 0.382 0.0466 -#> 2 2 0.781 0.0330 -#> 3 3 0.426 0.0363 -#> 4 4 0.558 0.0481 -#> 5 5 0.956 0.0622
+#> <chr> <dbl> <dbl> +#> 1 1 0.382 0.0466 +#> 2 2 0.781 0.0330 +#> 3 3 0.426 0.0363 +#> 4 4 0.558 0.0481 +#> 5 5 0.956 0.0622
# getting Bayes factor in favor of null hypothesis bf_meta( data = df, diff --git a/docs/reference/bf_oneway_anova.html b/docs/reference/bf_oneway_anova.html index ad687935..e6605f07 100644 --- a/docs/reference/bf_oneway_anova.html +++ b/docs/reference/bf_oneway_anova.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1
@@ -237,13 +237,13 @@

Examp y = Sepal.Length, bf.prior = 0.8, output = "results" -)
#> # A tibble: 1 x 8 +)
#> # A tibble: 1 x 8 #> bf10 error bf01 log_e_bf10 log_e_bf01 log_10_bf10 log_10_bf01 -#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 2.03e28 0.0000000478 4.93e-29 65.2 -65.2 28.3 -28.3 +#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 2.03e28 0.0000000478 4.93e-29 65.2 -65.2 28.3 -28.3 #> bf.prior -#> <dbl> -#> 1 0.8
+#> <dbl> +#> 1 0.8
# within-subjects ------------------------------------------------------- bf_oneway_anova( data = bugs_long, diff --git a/docs/reference/bf_ttest.html b/docs/reference/bf_ttest.html index d3a26c74..ddca0137 100644 --- a/docs/reference/bf_ttest.html +++ b/docs/reference/bf_ttest.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1
@@ -277,13 +277,13 @@

Examp y = wt, paired = FALSE, output = "results" -)
#> # A tibble: 1 x 8 +)
#> # A tibble: 1 x 8 #> bf10 error bf01 log_e_bf10 log_e_bf01 log_10_bf10 log_10_bf01 -#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 1383. 0.00000000341 0.000723 7.23 -7.23 3.14 -3.14 +#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 1383. 0.00000000341 0.000723 7.23 -7.23 3.14 -3.14 #> bf.prior -#> <dbl> -#> 1 0.707
+#> <dbl> +#> 1 0.707
# for paired sample test bf_ttest( data = dplyr::filter( @@ -295,13 +295,13 @@

Examp y = rating, paired = TRUE, output = "results" -)

#> t is large; approximation invoked.
#> # A tibble: 1 x 8 +)
#> t is large; approximation invoked.
#> # A tibble: 1 x 8 #> bf10 error bf01 log_e_bf10 log_e_bf01 log_10_bf10 log_10_bf01 -#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 1.20e61 1.17e-69 8.36e-62 141. -141. 61.1 -61.1 +#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 1.20e61 1.17e-69 8.36e-62 141. -141. 61.1 -61.1 #> bf.prior -#> <dbl> -#> 1 0.707
+#> <dbl> +#> 1 0.707
# ------------------- one-samples test ----------------------------------- # to get caption (default) @@ -321,10 +321,10 @@

Examp test.value = 5.85, bf.prior = 0.8, output = "results" -)

#> # A tibble: 1 x 8 +)
#> # A tibble: 1 x 8 #> bf10 error bf01 log_e_bf10 log_e_bf01 log_10_bf10 log_10_bf01 bf.prior -#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 0.0810 0.0000128 12.3 -2.51 2.51 -1.09 1.09 0.8
+#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 0.0810 0.0000128 12.3 -2.51 2.51 -1.09 1.09 0.8 @@ -175,22 +175,22 @@

Details all anthropods. Subset of the data reported by Ryan et al. (2013).

Examples

- 
dim(bugs_long)
#> [1] 372   6
head(bugs_long)
#> # A tibble: 6 x 6
+    
dim(bugs_long)
#> [1] 372   6
head(bugs_long)
#> # A tibble: 6 x 6
 #>   subject gender region        education condition desire
-#>     <int> <fct>  <fct>         <fct>     <chr>      <dbl>
-#> 1       1 Female North America some      LDLF           6
-#> 2       2 Female North America advance   LDLF          10
-#> 3       3 Female Europe        college   LDLF           5
-#> 4       4 Female North America college   LDLF           6
-#> 5       5 Female North America some      LDLF           3
-#> 6       6 Female Europe        some      LDLF           2
dplyr::glimpse(bugs_long)
#> Observations: 372
+#>     <int> <fct>  <fct>         <fct>     <chr>      <dbl>
+#> 1       1 Female North America some      LDLF           6
+#> 2       2 Female North America advance   LDLF          10
+#> 3       3 Female Europe        college   LDLF           5
+#> 4       4 Female North America college   LDLF           6
+#> 5       5 Female North America some      LDLF           3
+#> 6       6 Female Europe        some      LDLF           2
dplyr::glimpse(bugs_long)
#> Observations: 372
 #> Variables: 6
-#> $ subject   <int> 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17...
-#> $ gender    <fct> Female, Female, Female, Female, Female, Female, Female, F...
-#> $ region    <fct> North America, North America, Europe, North America, Nort...
-#> $ education <fct> some, advance, college, college, some, some, some, high, ...
-#> $ condition <chr> "LDLF", "LDLF", "LDLF", "LDLF", "LDLF", "LDLF", "LDLF", "...
-#> $ desire    <dbl> 6.0, 10.0, 5.0, 6.0, 3.0, 2.0, 10.0, 10.0, 9.5, 8.5, 0.0,...

+#> $ subject   <int> 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17...
+#> $ gender    <fct> Female, Female, Female, Female, Female, Female, Female, F...
+#> $ region    <fct> North America, North America, Europe, North America, Nort...
+#> $ education <fct> some, advance, college, college, some, some, some, high, ...
+#> $ condition <chr> "LDLF", "LDLF", "LDLF", "LDLF", "LDLF", "LDLF", "LDLF", "...
+#> $ desire    <dbl> 6.0, 10.0, 5.0, 6.0, 3.0, 2.0, 10.0, 10.0, 9.5, 8.5, 0.0,...
diff --git a/docs/reference/effsize_t_parametric.html b/docs/reference/effsize_t_parametric.html index e39b7a93..055b65a5 100644 --- a/docs/reference/effsize_t_parametric.html +++ b/docs/reference/effsize_t_parametric.html @@ -80,7 +80,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 @@ -261,13 +261,13 @@

Examp formula = sleep_rem ~ vore, data = msleep_short, tobject = tobj1 -)
#> # A tibble: 1 x 9 +)
#> # A tibble: 1 x 9 #> method estimate conf.low conf.high conf.level alternative paired -#> <chr> <dbl> <dbl> <dbl> <dbl> <chr> <lgl> -#> 1 Hedges's g 0.614 -0.223 1.32 0.95 two.sided FALSE +#> <chr> <dbl> <dbl> <dbl> <dbl> <chr> <lgl> +#> 1 Hedges's g 0.614 -0.223 1.32 0.95 two.sided FALSE #> noncentral var.equal -#> <lgl> <lgl> -#> 1 TRUE FALSE
+#> <lgl> <lgl> +#> 1 TRUE FALSE
# changing defaults tobj2 <- t.test( formula = sleep_rem ~ vore, @@ -285,13 +285,13 @@

Examp conf.level = .99, noncentral = FALSE, tobject = tobj2 -)

#> # A tibble: 1 x 9 +)
#> # A tibble: 1 x 9 #> method estimate conf.low conf.high conf.level alternative paired -#> <chr> <dbl> <dbl> <dbl> <dbl> <chr> <lgl> -#> 1 Hedges's g 0.614 -0.582 1.81 0.99 two.sided FALSE +#> <chr> <dbl> <dbl> <dbl> <dbl> <chr> <lgl> +#> 1 Hedges's g 0.614 -0.582 1.81 0.99 two.sided FALSE #> noncentral var.equal -#> <lgl> <lgl> -#> 1 FALSE FALSE
+#> <lgl> <lgl> +#> 1 FALSE FALSE
#---------------- one-sample test ------------------------------------ tobj3 <- t.test( @@ -307,13 +307,13 @@

Examp conf.level = .90, noncentral = TRUE, tobject = tobj3 -)

#> # A tibble: 1 x 9 +)
#> # A tibble: 1 x 9 #> method estimate conf.low conf.high conf.level alternative paired -#> <chr> <dbl> <dbl> <dbl> <dbl> <chr> <chr> -#> 1 Hedges's g -0.269 -0.570 0.0140 0.9 two.sided NA +#> <chr> <dbl> <dbl> <dbl> <dbl> <chr> <chr> +#> 1 Hedges's g -0.269 -0.570 0.0140 0.9 two.sided NA #> noncentral var.equal -#> <lgl> <lgl> -#> 1 TRUE FALSE
# } +#> <lgl> <lgl> +#> 1 TRUE FALSE
# }
diff --git a/docs/reference/expr_anova_bayes.html b/docs/reference/expr_anova_bayes.html index f666d5e4..4597f059 100644 --- a/docs/reference/expr_anova_bayes.html +++ b/docs/reference/expr_anova_bayes.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_anova_nonparametric.html b/docs/reference/expr_anova_nonparametric.html index cd046265..79517095 100644 --- a/docs/reference/expr_anova_nonparametric.html +++ b/docs/reference/expr_anova_nonparametric.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_anova_parametric.html b/docs/reference/expr_anova_parametric.html index 5c0f7821..5ef63829 100644 --- a/docs/reference/expr_anova_parametric.html +++ b/docs/reference/expr_anova_parametric.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_anova_robust.html b/docs/reference/expr_anova_robust.html index db46e7d0..8231da64 100644 --- a/docs/reference/expr_anova_robust.html +++ b/docs/reference/expr_anova_robust.html @@ -80,7 +80,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_contingency_tab.html b/docs/reference/expr_contingency_tab.html index 95b474b5..f2f19502 100644 --- a/docs/reference/expr_contingency_tab.html +++ b/docs/reference/expr_contingency_tab.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_corr_test.html b/docs/reference/expr_corr_test.html index 8b4672a4..3de43faa 100644 --- a/docs/reference/expr_corr_test.html +++ b/docs/reference/expr_corr_test.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_meta_parametric.html b/docs/reference/expr_meta_parametric.html index bef5373c..6dcbab9a 100644 --- a/docs/reference/expr_meta_parametric.html +++ b/docs/reference/expr_meta_parametric.html @@ -80,7 +80,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 @@ -297,10 +297,10 @@

Examp data = df_results, messages = FALSE, output = "tidy" -)
#> # A tibble: 1 x 7 +)
#> # A tibble: 1 x 7 #> estimate std.error statistic p.value conf.low conf.high term -#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <chr> -#> 1 0.619 0.108 5.74 0.00000000968 0.407 0.830 summary effect
+#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <chr> +#> 1 0.619 0.108 5.74 0.00000000968 0.407 0.830 summary effect
# making caption expr_meta_parametric( data = df_results, @@ -315,13 +315,13 @@

Examp data = df_results, messages = FALSE, output = "glance" -)

#> # A tibble: 1 x 12 +)
#> # A tibble: 1 x 12 #> tau2 se.tau2 k p m QE QEp QM QMp I2 -#> <dbl> <dbl> <int> <int> <int> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 0.0561 0.0411 5 1 1 109. 1.48e-22 32.9 0.00000000968 96.8 +#> <dbl> <dbl> <int> <int> <int> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 0.0561 0.0411 5 1 1 109. 1.48e-22 32.9 0.00000000968 96.8 #> H2 int.only -#> <dbl> <lgl> -#> 1 31.3 TRUE
# } +#> <dbl> <lgl> +#> 1 31.3 TRUE
# }
diff --git a/docs/reference/expr_t_bayes.html b/docs/reference/expr_t_bayes.html index f2e733dd..f45db074 100644 --- a/docs/reference/expr_t_bayes.html +++ b/docs/reference/expr_t_bayes.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_t_nonparametric.html b/docs/reference/expr_t_nonparametric.html index 9ef2dcc2..7574275f 100644 --- a/docs/reference/expr_t_nonparametric.html +++ b/docs/reference/expr_t_nonparametric.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_t_onesample.html b/docs/reference/expr_t_onesample.html index daccab4f..8f8d8e54 100644 --- a/docs/reference/expr_t_onesample.html +++ b/docs/reference/expr_t_onesample.html @@ -80,7 +80,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_t_parametric.html b/docs/reference/expr_t_parametric.html index 911853ee..19731c21 100644 --- a/docs/reference/expr_t_parametric.html +++ b/docs/reference/expr_t_parametric.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_t_robust.html b/docs/reference/expr_t_robust.html index 1f6161e1..d5d22111 100644 --- a/docs/reference/expr_t_robust.html +++ b/docs/reference/expr_t_robust.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/expr_template.html b/docs/reference/expr_template.html index 84579f8f..58ffda00 100644 --- a/docs/reference/expr_template.html +++ b/docs/reference/expr_template.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/index.html b/docs/reference/index.html index ce6ac349..2f52be07 100644 --- a/docs/reference/index.html +++ b/docs/reference/index.html @@ -75,7 +75,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 diff --git a/docs/reference/intent_morality.html b/docs/reference/intent_morality.html index 76b79c94..4eb24314 100644 --- a/docs/reference/intent_morality.html +++ b/docs/reference/intent_morality.html @@ -77,7 +77,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 @@ -185,25 +185,25 @@

Details items. Each of the item had a different type of harm.

Examples

- 
dim(intent_morality)
#> [1] 4016    9
head(intent_morality)
#> # A tibble: 6 x 9
+    
dim(intent_morality)
#> [1] 4016    9
head(intent_morality)
#> # A tibble: 6 x 9
 #>      id gender item  harm      belief  outcome condition question  rating
-#>   <int> <fct>  <fct> <fct>     <fct>   <fct>   <fct>     <fct>      <int>
-#> 1     2 female Grace Poisoning neutral neutral neutral   wrongness      4
-#> 2    11 female Grace Poisoning neutral neutral neutral   wrongness      1
-#> 3    16 male   Grace Poisoning neutral neutral neutral   wrongness      1
-#> 4    17 male   Grace Poisoning neutral neutral neutral   wrongness      1
-#> 5    20 male   Grace Poisoning neutral neutral neutral   wrongness      2
-#> 6    22 male   Grace Poisoning neutral neutral neutral   wrongness      1
dplyr::glimpse(intent_morality)
#> Observations: 4,016
+#>   <int> <fct>  <fct> <fct>     <fct>   <fct>   <fct>     <fct>      <int>
+#> 1     2 female Grace Poisoning neutral neutral neutral   wrongness      4
+#> 2    11 female Grace Poisoning neutral neutral neutral   wrongness      1
+#> 3    16 male   Grace Poisoning neutral neutral neutral   wrongness      1
+#> 4    17 male   Grace Poisoning neutral neutral neutral   wrongness      1
+#> 5    20 male   Grace Poisoning neutral neutral neutral   wrongness      2
+#> 6    22 male   Grace Poisoning neutral neutral neutral   wrongness      1
dplyr::glimpse(intent_morality)
#> Observations: 4,016
 #> Variables: 9
-#> $ id        <int> 2, 11, 16, 17, 20, 22, 24, 30, 31, 33, 39, 40, 52, 53, 58...
-#> $ gender    <fct> female, female, male, male, male, male, male, male, femal...
-#> $ item      <fct> Grace, Grace, Grace, Grace, Grace, Grace, Grace, Grace, G...
-#> $ harm      <fct> Poisoning, Poisoning, Poisoning, Poisoning, Poisoning, Po...
-#> $ belief    <fct> neutral, neutral, neutral, neutral, neutral, neutral, neu...
-#> $ outcome   <fct> neutral, neutral, neutral, neutral, neutral, neutral, neu...
-#> $ condition <fct> neutral, neutral, neutral, neutral, neutral, neutral, neu...
-#> $ question  <fct> wrongness, wrongness, wrongness, wrongness, wrongness, wr...
-#> $ rating    <int> 4, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, ...

+#> $ id        <int> 2, 11, 16, 17, 20, 22, 24, 30, 31, 33, 39, 40, 52, 53, 58...
+#> $ gender    <fct> female, female, male, male, male, male, male, male, femal...
+#> $ item      <fct> Grace, Grace, Grace, Grace, Grace, Grace, Grace, Grace, G...
+#> $ harm      <fct> Poisoning, Poisoning, Poisoning, Poisoning, Poisoning, Po...
+#> $ belief    <fct> neutral, neutral, neutral, neutral, neutral, neutral, neu...
+#> $ outcome   <fct> neutral, neutral, neutral, neutral, neutral, neutral, neu...
+#> $ condition <fct> neutral, neutral, neutral, neutral, neutral, neutral, neu...
+#> $ question  <fct> wrongness, wrongness, wrongness, wrongness, wrongness, wr...
+#> $ rating    <int> 4, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, ...
@@ -175,22 +175,22 @@

Details

This is a modified dataset from datasets package.

Examples

- 
dim(iris_long)
#> [1] 600   6
head(iris_long)
#> # A tibble: 6 x 6
+    
dim(iris_long)
#> [1] 600   6
head(iris_long)
#> # A tibble: 6 x 6
 #>      id Species condition    attribute measure value
-#>   <int> <fct>   <fct>        <fct>     <fct>   <dbl>
-#> 1     1 setosa  Sepal.Length Sepal     Length    5.1
-#> 2     2 setosa  Sepal.Length Sepal     Length    4.9
-#> 3     3 setosa  Sepal.Length Sepal     Length    4.7
-#> 4     4 setosa  Sepal.Length Sepal     Length    4.6
-#> 5     5 setosa  Sepal.Length Sepal     Length    5  
-#> 6     6 setosa  Sepal.Length Sepal     Length    5.4
dplyr::glimpse(iris_long)
#> Observations: 600
+#>   <int> <fct>   <fct>        <fct>     <fct>   <dbl>
+#> 1     1 setosa  Sepal.Length Sepal     Length    5.1
+#> 2     2 setosa  Sepal.Length Sepal     Length    4.9
+#> 3     3 setosa  Sepal.Length Sepal     Length    4.7
+#> 4     4 setosa  Sepal.Length Sepal     Length    4.6
+#> 5     5 setosa  Sepal.Length Sepal     Length    5  
+#> 6     6 setosa  Sepal.Length Sepal     Length    5.4
dplyr::glimpse(iris_long)
#> Observations: 600
 #> Variables: 6
-#> $ id        <int> 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17...
-#> $ Species   <fct> setosa, setosa, setosa, setosa, setosa, setosa, setosa, s...
-#> $ condition <fct> Sepal.Length, Sepal.Length, Sepal.Length, Sepal.Length, S...
-#> $ attribute <fct> Sepal, Sepal, Sepal, Sepal, Sepal, Sepal, Sepal, Sepal, S...
-#> $ measure   <fct> Length, Length, Length, Length, Length, Length, Length, L...
-#> $ value     <dbl> 5.1, 4.9, 4.7, 4.6, 5.0, 5.4, 4.6, 5.0, 4.4, 4.9, 5.4, 4....

+#> $ id        <int> 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17...
+#> $ Species   <fct> setosa, setosa, setosa, setosa, setosa, setosa, setosa, s...
+#> $ condition <fct> Sepal.Length, Sepal.Length, Sepal.Length, Sepal.Length, S...
+#> $ attribute <fct> Sepal, Sepal, Sepal, Sepal, Sepal, Sepal, Sepal, Sepal, S...
+#> $ measure   <fct> Length, Length, Length, Length, Length, Length, Length, L...
+#> $ value     <dbl> 5.1, 4.9, 4.7, 4.6, 5.0, 5.4, 4.6, 5.0, 4.4, 4.9, 5.4, 4....
@@ -181,20 +181,20 @@

Examp x = condition, y = value, paired = TRUE -)
#> # A tibble: 150 x 5 +)
#> # A tibble: 150 x 5 #> rowid Petal.Length Petal.Width Sepal.Length Sepal.Width -#> <int> <dbl> <dbl> <dbl> <dbl> -#> 1 1 1.4 0.2 5.1 3.5 -#> 2 2 1.4 0.2 4.9 3 -#> 3 3 1.3 0.2 4.7 3.2 -#> 4 4 1.5 0.2 4.6 3.1 -#> 5 5 1.4 0.2 5 3.6 -#> 6 6 1.7 0.4 5.4 3.9 -#> 7 7 1.4 0.3 4.6 3.4 -#> 8 8 1.5 0.2 5 3.4 -#> 9 9 1.4 0.2 4.4 2.9 -#> 10 10 1.5 0.1 4.9 3.1 -#> # ... with 140 more rows
# } +#> <int> <dbl> <dbl> <dbl> <dbl> +#> 1 1 1.4 0.2 5.1 3.5 +#> 2 2 1.4 0.2 4.9 3 +#> 3 3 1.3 0.2 4.7 3.2 +#> 4 4 1.5 0.2 4.6 3.1 +#> 5 5 1.4 0.2 5 3.6 +#> 6 6 1.7 0.4 5.4 3.9 +#> 7 7 1.4 0.3 4.6 3.4 +#> 8 8 1.5 0.2 5 3.4 +#> 9 9 1.4 0.2 4.4 2.9 +#> 10 10 1.5 0.1 4.9 3.1 +#> # ... with 140 more rows
# }
@@ -180,32 +180,32 @@

Details genre category.

Examples

- 
dim(movies_long)
#> [1] 1579    8
head(movies_long)
#> # A tibble: 6 x 8
+    
dim(movies_long)
#> [1] 1579    8
head(movies_long)
#> # A tibble: 6 x 8
 #>   title                                               year length budget rating
-#>   <chr>                                              <int>  <int>  <dbl>  <dbl>
-#> 1 Shawshank Redemption, The                           1994    142     25    9.1
-#> 2 Lord of the Rings: The Return of the King, The      2003    251     94    9  
-#> 3 Lord of the Rings: The Fellowship of the Ring, The  2001    208     93    8.8
-#> 4 Lord of the Rings: The Two Towers, The              2002    223     94    8.8
-#> 5 Pulp Fiction                                        1994    168      8    8.8
-#> 6 Schindler's List                                    1993    195     25    8.8
+#>   <chr>                                              <int>  <int>  <dbl>  <dbl>
+#> 1 Shawshank Redemption, The                           1994    142     25    9.1
+#> 2 Lord of the Rings: The Return of the King, The      2003    251     94    9  
+#> 3 Lord of the Rings: The Fellowship of the Ring, The  2001    208     93    8.8
+#> 4 Lord of the Rings: The Two Towers, The              2002    223     94    8.8
+#> 5 Pulp Fiction                                        1994    168      8    8.8
+#> 6 Schindler's List                                    1993    195     25    8.8
 #>    votes mpaa  genre 
-#>    <int> <fct> <fct> 
-#> 1 149494 R     Drama 
-#> 2 103631 PG-13 Action
-#> 3 157608 PG-13 Action
-#> 4 114797 PG-13 Action
-#> 5 132745 R     Drama 
-#> 6  97667 R     Drama 
dplyr::glimpse(movies_long)
#> Observations: 1,579
+#>    <int> <fct> <fct> 
+#> 1 149494 R     Drama 
+#> 2 103631 PG-13 Action
+#> 3 157608 PG-13 Action
+#> 4 114797 PG-13 Action
+#> 5 132745 R     Drama 
+#> 6  97667 R     Drama 
dplyr::glimpse(movies_long)
#> Observations: 1,579
 #> Variables: 8
-#> $ title  <chr> "Shawshank Redemption, The", "Lord of the Rings: The Return ...
-#> $ year   <int> 1994, 2003, 2001, 2002, 1994, 1993, 1977, 1980, 1968, 2002, ...
-#> $ length <int> 142, 251, 208, 223, 168, 195, 125, 129, 158, 135, 93, 113, 1...
-#> $ budget <dbl> 25.0, 94.0, 93.0, 94.0, 8.0, 25.0, 11.0, 18.0, 5.0, 3.3, 1.8...
-#> $ rating <dbl> 9.1, 9.0, 8.8, 8.8, 8.8, 8.8, 8.8, 8.8, 8.7, 8.7, 8.7, 8.7, ...
-#> $ votes  <int> 149494, 103631, 157608, 114797, 132745, 97667, 134640, 10370...
-#> $ mpaa   <fct> R, PG-13, PG-13, PG-13, R, R, PG, PG, PG-13, R, PG, R, R, R,...
-#> $ genre  <fct> Drama, Action, Action, Action, Drama, Drama, Action, Action,...

+#> $ title  <chr> "Shawshank Redemption, The", "Lord of the Rings: The Return ...
+#> $ year   <int> 1994, 2003, 2001, 2002, 1994, 1993, 1977, 1980, 1968, 2002, ...
+#> $ length <int> 142, 251, 208, 223, 168, 195, 125, 129, 158, 135, 93, 113, 1...
+#> $ budget <dbl> 25.0, 94.0, 93.0, 94.0, 8.0, 25.0, 11.0, 18.0, 5.0, 3.3, 1.8...
+#> $ rating <dbl> 9.1, 9.0, 8.8, 8.8, 8.8, 8.8, 8.8, 8.8, 8.7, 8.7, 8.7, 8.7, ...
+#> $ votes  <int> 149494, 103631, 157608, 114797, 132745, 97667, 134640, 10370...
+#> $ mpaa   <fct> R, PG-13, PG-13, PG-13, R, R, PG, PG, PG-13, R, PG, R, R, R,...
+#> $ genre  <fct> Drama, Action, Action, Action, Drama, Drama, Action, Action,...
@@ -182,37 +182,37 @@

Details and NC-17 movies were removed.

Examples

- 
dim(movies_wide)
#> [1] 1579   13
head(movies_wide)
#> # A tibble: 6 x 13
+    
dim(movies_wide)
#> [1] 1579   13
head(movies_wide)
#> # A tibble: 6 x 13
 #>   title                       year length budget rating votes mpaa  Action
-#>   <chr>                      <int>  <int>  <dbl>  <dbl> <int> <fct>  <int>
-#> 1 'Til There Was You          1997    113   23      4.8   799 PG-13      0
-#> 2 10 Things I Hate About You  1999     97   16      6.7 19095 PG-13      0
-#> 3 100 Mile Rule               2002     98    1.1    5.6   181 R          0
-#> 4 13 Going On 30              2004     98   37      6.4  7859 PG-13      0
-#> 5 13th Warrior, The           1999    102   85      6.1 14344 R          1
-#> 6 15 Minutes                  2001    120   42      6.1 10866 R          0
+#>   <chr>                      <int>  <int>  <dbl>  <dbl> <int> <fct>  <int>
+#> 1 'Til There Was You          1997    113   23      4.8   799 PG-13      0
+#> 2 10 Things I Hate About You  1999     97   16      6.7 19095 PG-13      0
+#> 3 100 Mile Rule               2002     98    1.1    5.6   181 R          0
+#> 4 13 Going On 30              2004     98   37      6.4  7859 PG-13      0
+#> 5 13th Warrior, The           1999    102   85      6.1 14344 R          1
+#> 6 15 Minutes                  2001    120   42      6.1 10866 R          0
 #>   Animation Comedy Drama Romance NumGenre
-#>       <int>  <int> <int>   <int>    <int>
-#> 1         0      1     0       1        2
-#> 2         0      1     0       1        2
-#> 3         0      1     0       0        1
-#> 4         0      1     1       1        3
-#> 5         0      0     0       0        1
-#> 6         0      0     1       0        1
dplyr::glimpse(movies_wide)
#> Observations: 1,579
+#>       <int>  <int> <int>   <int>    <int>
+#> 1         0      1     0       1        2
+#> 2         0      1     0       1        2
+#> 3         0      1     0       0        1
+#> 4         0      1     1       1        3
+#> 5         0      0     0       0        1
+#> 6         0      0     1       0        1
dplyr::glimpse(movies_wide)
#> Observations: 1,579
 #> Variables: 13
-#> $ title     <chr> "'Til There Was You", "10 Things I Hate About You", "100 ...
-#> $ year      <int> 1997, 1999, 2002, 2004, 1999, 2001, 1972, 2003, 1999, 200...
-#> $ length    <int> 113, 97, 98, 98, 102, 120, 180, 107, 101, 99, 129, 124, 9...
-#> $ budget    <dbl> 23.0, 16.0, 1.1, 37.0, 85.0, 42.0, 4.0, 76.0, 6.0, 26.0, ...
-#> $ rating    <dbl> 4.8, 6.7, 5.6, 6.4, 6.1, 6.1, 7.3, 5.1, 5.4, 2.5, 7.6, 8....
-#> $ votes     <int> 799, 19095, 181, 7859, 14344, 10866, 1754, 9556, 4514, 20...
-#> $ mpaa      <fct> PG-13, PG-13, R, PG-13, R, R, PG, PG-13, R, R, R, R, R, R...
-#> $ Action    <int> 0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 1, ...
-#> $ Animation <int> 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, ...
-#> $ Comedy    <int> 1, 1, 1, 1, 0, 0, 0, 0, 1, 1, 0, 0, 1, 0, 0, 1, 1, 1, 1, ...
-#> $ Drama     <int> 0, 0, 0, 1, 0, 1, 1, 0, 1, 0, 1, 1, 0, 1, 1, 0, 1, 0, 0, ...
-#> $ Romance   <int> 1, 1, 0, 1, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 1, 0, ...
-#> $ NumGenre  <int> 2, 2, 1, 3, 1, 1, 1, 1, 2, 1, 2, 1, 1, 1, 1, 2, 3, 2, 2, ...

+#> $ title     <chr> "'Til There Was You", "10 Things I Hate About You", "100 ...
+#> $ year      <int> 1997, 1999, 2002, 2004, 1999, 2001, 1972, 2003, 1999, 200...
+#> $ length    <int> 113, 97, 98, 98, 102, 120, 180, 107, 101, 99, 129, 124, 9...
+#> $ budget    <dbl> 23.0, 16.0, 1.1, 37.0, 85.0, 42.0, 4.0, 76.0, 6.0, 26.0, ...
+#> $ rating    <dbl> 4.8, 6.7, 5.6, 6.4, 6.1, 6.1, 7.3, 5.1, 5.4, 2.5, 7.6, 8....
+#> $ votes     <int> 799, 19095, 181, 7859, 14344, 10866, 1754, 9556, 4514, 20...
+#> $ mpaa      <fct> PG-13, PG-13, R, PG-13, R, R, PG, PG-13, R, R, R, R, R, R...
+#> $ Action    <int> 0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 1, ...
+#> $ Animation <int> 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, ...
+#> $ Comedy    <int> 1, 1, 1, 1, 0, 0, 0, 0, 1, 1, 0, 0, 1, 0, 0, 1, 1, 1, 1, ...
+#> $ Drama     <int> 0, 0, 0, 1, 0, 1, 1, 0, 1, 0, 1, 1, 0, 1, 1, 0, 1, 0, 0, ...
+#> $ Romance   <int> 1, 1, 0, 1, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 1, 1, 0, ...
+#> $ NumGenre  <int> 2, 2, 1, 3, 1, 1, 1, 1, 2, 1, 2, 1, 1, 1, 1, 2, 3, 2, 2, ...
diff --git a/docs/reference/robcor_ci.html b/docs/reference/robcor_ci.html index 0c32d0eb..1f1dfd5d 100644 --- a/docs/reference/robcor_ci.html +++ b/docs/reference/robcor_ci.html @@ -78,7 +78,7 @@ statsExpressions - 0.2.0.9000 + 0.2.1 @@ -221,10 +221,10 @@

Examp nboot = 25, conf.level = .99, conf.type = c("basic") -)
#> Warning: extreme order statistics used as endpoints
#> # A tibble: 1 x 9 +)
#> Warning: extreme order statistics used as endpoints
#> # A tibble: 1 x 9 #> estimate statistic p.value n conf V2 V3 conf.low conf.high -#> <dbl> <dbl> <dbl> <int> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 -0.804 -7.41 0.0000000293 32 0.99 25.9 0.13 -0.880 -0.738
# } +#> <dbl> <dbl> <dbl> <int> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 -0.804 -7.41 0.0000000293 32 0.99 25.9 0.13 -0.880 -0.738
# }
@@ -219,10 +219,10 @@

Examp x = Expt, y = Speed, nboot = 10 -)
#> # A tibble: 1 x 8 +)
#> # A tibble: 1 x 8 #> statistic parameter1 parameter2 p.value estimate conf conf.low conf.high -#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 3.62 4 36.9 0.0138 0.501 0.95 0.318 0.697
# } +#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 3.62 4 36.9 0.0138 0.501 0.95 0.318 0.697
# }
@@ -224,13 +224,13 @@

Examp y = value, nboot = 50, tr = 0.2 -)
#> # A tibble: 1 x 11 +)
#> # A tibble: 1 x 11 #> statistic conf.int1 conf.int2 std.error p.value parameter diff estimate conf -#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> -#> 1 -13.0 -2.25 -1.66 0.150 0 89 -1.96 0.625 0.95 +#> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> +#> 1 -13.0 -2.25 -1.66 0.150 0 89 -1.96 0.625 0.95 #> conf.low conf.high -#> <dbl> <dbl> -#> 1 0.226 0.811
# } +#> <dbl> <dbl> +#> 1 0.226 0.811
# }