install_conda.md

How to install pipeline's Conda environment

1. Install Conda.

2. Install Conda environment for pipeline.

$ conda/install_dependencies.sh

3. Initialize Conda and re-login.

$ conda init bash
$ exit

4. Configure pipeline's python2 and python3 environments.

$ conda/config_conda_env.sh
$ conda/config_conda_env_py3.sh

5. Update pipeline's Conda environment with pipeline's python source code. You need to run this step everytime you update (git pull) this pipeline.

$ conda/update_conda_env.sh