[bug] Update R version

[avahoffman]

I’m getting build errors when building from this image: Using this dockerfile: https://github.com/FredHutch/shiny-app-template/blob/master/Dockerfile

e.g.:

 > [2/7] RUN apt-get update:                                                                                                            
#5 0.612 Get:1 http://deb.debian.org/debian testing InRelease [164 kB]                                                                  
#5 3.598 Get:2 http://cdn-fastly.deb.debian.org/debian sid InRelease [161 kB]                                                           
#5 7.371 Get:3 http://cdn-fastly.deb.debian.org/debian sid/main amd64 Packages.diff/Index [63.6 kB]                                     
#5 11.86 Ign:3 http://cdn-fastly.deb.debian.org/debian sid/main amd64 Packages.diff/Index                                               
#5 12.04 Get:4 http://cdn-fastly.deb.debian.org/debian sid/main amd64 Packages [9,391 kB]
#5 24.89 Reading package lists...
#5 31.28 E: Repository 'http://deb.debian.org/debian testing InRelease' changed its 'Codename' value from 'bullseye' to 'bookworm'
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There seem to have been some updates in the past few years that have caused this.

Still building over here, but updating the r-base to FROM r-base:4.2.2 seems to fix the problem for me.

FYI @dtenenba

[dtenenba]

Thanks. I'm aware of this, need to update :latest. You can also change the base to:
fredhutch/r-shiny-base:4.2.0

fredhutch/r-shiny-base includes a lot of common dependencies not included by r-base.