RidgeFBA docs.md

RidgeFBA is a member of COBRA analyses family. It returns a unique flux distribution which is also more consistent with the actual values comparing to the similar methods. For the complete tutorial see here

This function can be called simply, by a single line of code:

using COBRA
flux_vector=RidgeFBA(metabolic_model,c,lambda)

Input:

metabolic model: The Metabolic model in .xml format.

c: A vector with the same length as the metabolic model reactions, determining the objective function.

lambda: Regularization coefficient for the L2 norm.

Output:

flux_vector: The calculated flux distribution.