NAMESPACE

# Generated by roxygen2: do not edit by hand

export(AddTargetAssay)
export(AddTrajectory)
export(CellPropPlot)
export(CoembedData)
export(CompareCellProp)
export(CorrelationHeatmap)
export(CorrelationPlot)
export(CreatePairedObject)
export(GRNHeatmap)
export(GRNPlot)
export(GRNSpatialPlot)
export(GetCorrelation)
export(GetGRN)
export(GetPairList)
export(GetTFGeneCorrelation)
export(GetTrajectory)
export(NetCentPlot)
export(PairCells)
export(PeakToGene)
export(PseudotimePlot)
export(RunDiffusionMap)
export(SelectGenes)
export(SelectTFs)
export(TopEmbGRN)
export(TrajectoryHeatmap)
export(TrajectoryPlot)
export(rowCorCpp)
import(Seurat)
import(destiny)
import(dplyr)
import(ggplot2)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,findOverlaps)
importFrom(GenomicRanges,resize)
importFrom(IRanges,IRanges)
importFrom(Rcpp,sourceCpp)
importFrom(S4Vectors,SimpleList)
importFrom(SeuratObject,GetAssayData)
importFrom(SummarizedExperiment,assay)
importFrom(factoextra,fviz_pca_biplot)
importFrom(ggraph,geom_edge_link)
importFrom(ggraph,geom_node_label)
importFrom(ggraph,geom_node_point)
importFrom(ggraph,scale_edge_color_viridis)
importFrom(ggrepel,geom_label_repel)
importFrom(igraph,E)
importFrom(igraph,V)
importFrom(igraph,betweenness)
importFrom(igraph,degree)
importFrom(igraph,graph_from_data_frame)
importFrom(igraph,layout_with_fr)
importFrom(igraph,page_rank)
importFrom(stats,as.formula)
importFrom(stats,p.adjust)
importFrom(utils,head)
useDynLib(scMEGA, .registration = TRUE)