diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 3a3e70f..e238553 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -1,6 +1,6 @@
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.5.0
+    rev: v4.6.0
     hooks:
       - id: trailing-whitespace
       - id: end-of-file-fixer
@@ -12,7 +12,7 @@ repos:
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
     # Ruff version.
-    rev: v0.1.5
+    rev: v0.4.9
     hooks:
       # Run the linter.
       - id: ruff
@@ -21,6 +21,6 @@ repos:
       - id: ruff-format
 
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v0.950
+    rev: v1.10.0
     hooks:
       - id: mypy
diff --git a/src/mps/czifile.py b/src/mps/czifile.py
index 4eae7f6..3198ff2 100644
--- a/src/mps/czifile.py
+++ b/src/mps/czifile.py
@@ -110,6 +110,7 @@
 array([10, 10, 10], dtype=uint8)
 
 """
+
 from __future__ import division
 from __future__ import print_function
 
diff --git a/src/mps/nd2file.py b/src/mps/nd2file.py
index db85381..4fc7865 100644
--- a/src/mps/nd2file.py
+++ b/src/mps/nd2file.py
@@ -30,6 +30,7 @@
 There are some heuristics for parsing files, so that even broken files (i.e. due to a crashed NIS instance)
 have a possibility to open.
 """
+
 from __future__ import division
 from __future__ import print_function
 from __future__ import unicode_literals
diff --git a/src/mps/scripts/analyze.py b/src/mps/scripts/analyze.py
index 7eaf45b..5824595 100644
--- a/src/mps/scripts/analyze.py
+++ b/src/mps/scripts/analyze.py
@@ -1,6 +1,7 @@
 """
 Analyze flourecense data
 """
+
 import datetime
 import json
 import logging
diff --git a/src/mps/scripts/mps2mp4.py b/src/mps/scripts/mps2mp4.py
index 97d18ba..4c9d37c 100644
--- a/src/mps/scripts/mps2mp4.py
+++ b/src/mps/scripts/mps2mp4.py
@@ -1,6 +1,7 @@
 """
 Create movie of data file
 """
+
 import logging
 from pathlib import Path
 from typing import Optional
diff --git a/src/mps/scripts/phase_plot.py b/src/mps/scripts/phase_plot.py
index 6df8b77..89f2f72 100644
--- a/src/mps/scripts/phase_plot.py
+++ b/src/mps/scripts/phase_plot.py
@@ -1,6 +1,7 @@
 """
 Make a phase plot with voltage on the x-axis
 and calcium on the y-axis."""
+
 import logging
 from pathlib import Path
 from typing import Optional
diff --git a/src/mps/scripts/split_pacing.py b/src/mps/scripts/split_pacing.py
index 8ed4ca9..606f8e9 100644
--- a/src/mps/scripts/split_pacing.py
+++ b/src/mps/scripts/split_pacing.py
@@ -2,6 +2,7 @@
 Run script on a folder with files and this will copy the files into
 folders with the same pacing frequency
 """
+
 import logging
 import shutil
 from pathlib import Path
diff --git a/src/mps/scripts/summary.py b/src/mps/scripts/summary.py
index fd50f2d..7e3566c 100644
--- a/src/mps/scripts/summary.py
+++ b/src/mps/scripts/summary.py
@@ -1,6 +1,7 @@
 """
 Create a summary pdf of all files in the a directory.
 """
+
 import logging
 import shutil
 from pathlib import Path
diff --git a/src/mps/tifffile.py b/src/mps/tifffile.py
index 79b8e9b..a502e7c 100644
--- a/src/mps/tifffile.py
+++ b/src/mps/tifffile.py
@@ -352,6 +352,7 @@
 ...         image = page.asarray()
 
 """
+
 from __future__ import division
 from __future__ import print_function