From adc5c2d8394e24df9d056236c50802eb0011b307 Mon Sep 17 00:00:00 2001 From: Sebastian Diaz Date: Mon, 2 Sep 2024 17:11:58 +0200 Subject: [PATCH] alphabetical order --- cg/constants/constants.py | 2 +- cg/constants/delivery.py | 12 ++++++------ 2 files changed, 7 insertions(+), 7 deletions(-) diff --git a/cg/constants/constants.py b/cg/constants/constants.py index 2c2727ca52..4e84c63948 100644 --- a/cg/constants/constants.py +++ b/cg/constants/constants.py @@ -135,7 +135,6 @@ class Workflow(StrEnum): BALSAMIC_QC: str = "balsamic-qc" BALSAMIC_UMI: str = "balsamic-umi" DEMULTIPLEX: str = "demultiplex" - RAW_DATA: str = "raw-data" FLUFFY: str = "fluffy" JASEN: str = "jasen" MICROSALT: str = "microsalt" @@ -143,6 +142,7 @@ class Workflow(StrEnum): MIP_RNA: str = "mip-rna" MUTANT: str = "mutant" RAREDISEASE: str = "raredisease" + RAW_DATA: str = "raw-data" RNAFUSION: str = "rnafusion" RSYNC: str = "rsync" SPRING: str = "spring" diff --git a/cg/constants/delivery.py b/cg/constants/delivery.py index a6aea02fdf..154624ade1 100644 --- a/cg/constants/delivery.py +++ b/cg/constants/delivery.py @@ -4,15 +4,15 @@ from cg.constants.housekeeper_tags import AlignmentFileTag, AnalysisTag, HermesFileTag ONLY_ONE_CASE_PER_TICKET: list[Workflow] = [ - Workflow.RAW_DATA, Workflow.MICROSALT, Workflow.MUTANT, + Workflow.RAW_DATA, ] SKIP_MISSING: list[Workflow] = [ - Workflow.RAW_DATA, Workflow.MICROSALT, Workflow.MUTANT, + Workflow.RAW_DATA, ] BALSAMIC_ANALYSIS_CASE_TAGS: list[set[str]] = [ @@ -172,10 +172,6 @@ "case_tags": MICROSALT_ANALYSIS_CASE_TAGS, "sample_tags": MICROSALT_ANALYSIS_SAMPLE_TAGS, }, - Workflow.RAW_DATA: { - "case_tags": FASTQ_ANALYSIS_CASE_TAGS, - "sample_tags": FASTQ_ANALYSIS_SAMPLE_TAGS, - }, Workflow.MUTANT: { "case_tags": MUTANT_ANALYSIS_CASE_TAGS, "sample_tags": MUTANT_ANALYSIS_SAMPLE_TAGS, @@ -184,6 +180,10 @@ "case_tags": CLINICAL_DELIVERY_TAGS, "sample_tags": CLINICAL_DELIVERY_TAGS, }, + Workflow.RAW_DATA: { + "case_tags": FASTQ_ANALYSIS_CASE_TAGS, + "sample_tags": FASTQ_ANALYSIS_SAMPLE_TAGS, + }, Workflow.RNAFUSION: { "case_tags": CLINICAL_DELIVERY_TAGS, "sample_tags": CLINICAL_DELIVERY_TAGS,