From ac3496815463d280a92c9e7f40eec7df23777ffe Mon Sep 17 00:00:00 2001 From: Henrik Stranneheim Date: Mon, 9 Sep 2024 08:06:50 +0200 Subject: [PATCH 1/2] Rm deprecated template dir (#3672) ### Changed - Remove deprecated dir --- Dockerfile | 1 - templates/config.yaml | 32 -------------------------------- 2 files changed, 33 deletions(-) delete mode 100644 templates/config.yaml diff --git a/Dockerfile b/Dockerfile index d31725b1ff..8975a393e3 100644 --- a/Dockerfile +++ b/Dockerfile @@ -36,7 +36,6 @@ RUN pip install --no-cache-dir poetry \ && poetry install --no-interaction --no-ansi COPY cg ./cg -COPY templates ./templates CMD gunicorn \ --workers=$GUNICORN_WORKERS \ diff --git a/templates/config.yaml b/templates/config.yaml deleted file mode 100644 index 4df605b7a9..0000000000 --- a/templates/config.yaml +++ /dev/null @@ -1,32 +0,0 @@ ---- -database: "mysql+pymysql://USERNAME:PASSWORD@HOST:PORT/DATABASE" -madeline_exe: "/mnt/hds/proj/bioinfo/resources/madeline2" - -housekeeper: - database: "mysql+pymysql://USERNAME:PASSWORD@HOST:PORT/DATABASE" - root: "./DEVELOP/bundles" - -trailblazer: - database: "mysql+pymysql://USERNAME:PASSWORD@HOST:PORT/DATABASE" - script: /mnt/hds/proj/bioinfo/SERVER/miniconda/bin/mip.pl - mip_config: "/mnt/hds/proj/cust000/STAGE/config/mip.v4.yaml" - root: /mnt/hds/proj/bioinfo/MIP_ANALYSIS/families - -lims: - host: url - username: username - password: password - -scout: - database: "mongodb://USERNAME:PASSWORD@HOST:PORT/DATABASE" - database_name: database - -loqusdb: - database: "mongodb://USERNAME:PASSWORD@HOST:PORT/DATABASE" - database_name: database - -chanjo: - database: "mysql+pymysql://USERNAME:PASSWORD@HOST:PORT/DATABASE" - -genotype: - database: "mysql+pymysql://USERNAME:PASSWORD@HOST:PORT/DATABASE" From cd028e6bfdfe8d8a7de9ed9de81e92dfa15a5c7a Mon Sep 17 00:00:00 2001 From: Clinical Genomics Bot Date: Mon, 9 Sep 2024 06:07:17 +0000 Subject: [PATCH 2/2] =?UTF-8?q?Bump=20version:=2062.2.14=20=E2=86=92=2062.?= =?UTF-8?q?2.15=20[skip=20ci]?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .bumpversion.cfg | 2 +- cg/__init__.py | 2 +- pyproject.toml | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/.bumpversion.cfg b/.bumpversion.cfg index 275dcc910e..dfd710fdf9 100644 --- a/.bumpversion.cfg +++ b/.bumpversion.cfg @@ -1,5 +1,5 @@ [bumpversion] -current_version = 62.2.14 +current_version = 62.2.15 commit = True tag = True tag_name = v{new_version} diff --git a/cg/__init__.py b/cg/__init__.py index 7d9fdccf87..789bb7b5f6 100644 --- a/cg/__init__.py +++ b/cg/__init__.py @@ -1,2 +1,2 @@ __title__ = "cg" -__version__ = "62.2.14" +__version__ = "62.2.15" diff --git a/pyproject.toml b/pyproject.toml index 8d40ff18db..7eea71908a 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -4,7 +4,7 @@ build-backend = "poetry.core.masonry.api" [tool.poetry] name = "cg" -version = "62.2.14" +version = "62.2.15" description = "Clinical Genomics command center" authors = ["Clinical Genomics "] readme = "README.md"