diff --git a/.github/workflows/cd.yml b/.github/workflows/cd.yml new file mode 100644 index 0000000..0ecba48 --- /dev/null +++ b/.github/workflows/cd.yml @@ -0,0 +1,18 @@ +name: Continuous Deployment + +on: + push: + branches: + - main + +jobs: + deployment: + runs-on: ubuntu-latest + steps: + - + name: Create release + id: release-please + uses: google-github-actions/release-please-action@v3 + with: + release-type: python + package-name: fitburst diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml new file mode 100644 index 0000000..d2de410 --- /dev/null +++ b/.github/workflows/ci.yml @@ -0,0 +1,59 @@ +name: CI + +on: + push: + paths-ignore: + - 'docs/**' + branches: [ main ] + pull_request: + paths-ignore: + - 'docs/**' + branches: + - '**' + +jobs: + pre-commit-checks: + runs-on: ubuntu-latest + steps: + - + name: Checkout Repository + uses: actions/checkout@v3 + - + name: Install Poetry + run: pipx install poetry + - + name: Setup Python + uses: actions/setup-python@v4 + with: + python-version: 3.8 + cache: 'poetry' + - + name: Install Dependencies + run: poetry install + - + name: Run Pre-Commit + run: poetry run pre-commit run --all-files --show-diff-on-failure + + tests: + needs: pre-commit-checks + runs-on: ubuntu-latest + steps: + - + name: Checkout Repository + uses: actions/checkout@v3 + - + name: Install Poetry + run: pipx install poetry + - + name: Setup Python + uses: actions/setup-python@v4 + with: + python-version: 3.8 + cache: 'poetry' + - + name: Install Dependencies + run: poetry install + + - name: Run Tests + run: | + poetry run pytest diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml deleted file mode 100644 index b7c3e8b..0000000 --- a/.github/workflows/tests.yml +++ /dev/null @@ -1,45 +0,0 @@ -name: Tests - -on: - push: - paths-ignore: - - 'docs/**' - branches: [ main ] - pull_request: - paths-ignore: - - 'docs/**' - branches: - - '**' - -jobs: - pre-commit-checks: - runs-on: ubuntu-latest - steps: - - uses: actions/checkout@v2 - - name: Set up Python 3.7 - uses: actions/setup-python@v1 - with: - python-version: 3.7 - - name: Linting - run: | - pip install pre-commit - pre-commit run --all-files - - tests: - needs: pre-commit-checks - runs-on: ubuntu-latest - steps: - - uses: actions/checkout@v2 - - name: Set up Python - uses: actions/setup-python@v2 - - uses: webfactory/ssh-agent@v0.4.1 - with: - ssh-private-key: ${{ secrets.CHIMEFRB_BOT_SSH_PRIVATE_KEY }} - - name: Installation - run: | - pip install --upgrade pip - pip install poetry - poetry install - - name: Run Tests - run: | - poetry run pytest diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index d5c6448..d157dcb 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,62 +1,98 @@ repos: - - - repo: https://github.com/pycqa/isort - rev: 5.5.4 - hooks: - - id: isort - args: [ --multi-line=3, --trailing-comma, --force-grid-wrap=0, --use-parentheses, --line-width=88] - - - repo: https://gitlab.com/pycqa/flake8 - rev: 3.8.4 - hooks: - - id: flake8 - additional_dependencies: ["flake8-eradicate==0.4.0"] - args: [--max-line-length=89] - - - - repo: https://github.com/asottile/pyupgrade - rev: v2.7.2 - hooks: - - id: pyupgrade - args: [--py36-plus] - - - repo: https://github.com/psf/black - rev: 20.8b1 - hooks: - - id: black - - - repo: https://github.com/pre-commit/mirrors-mypy - rev: v0.782 - hooks: - - id: mypy - args: [--ignore-missing-imports] - - - repo: https://github.com/pycqa/pydocstyle - rev: 4.0.0 # pick a git hash / tag to point to - hooks: - - id: pydocstyle - args: [--convention=numpy, --add-ignore=D104] - - - repo: https://github.com/asottile/blacken-docs - rev: v1.8.0 - hooks: - - id: blacken-docs - additional_dependencies: [black==20.8b1] - - - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v3.2.0 - hooks: - - id: trailing-whitespace - exclude: ^docs/* - - id: end-of-file-fixer - exclude: ^docs/* - - id: debug-statements - - id: check-case-conflict - - id: check-json - - id: check-yaml - - id: mixed-line-ending - - id: check-toml - - id: pretty-format-json - - id: check-docstring-first - - id: check-symlinks - - id: detect-private-key +- hooks: + - args: + - --multi-line=3 + - --trailing-comma + - --force-grid-wrap=0 + - --use-parentheses + - --line-width=88 + - --ensure-newline-before-comments + id: isort + repo: https://github.com/pycqa/isort + rev: 5.12.0 +- hooks: + - args: + - --max-line-length=89 + - --max-complexity=15 + id: flake8 + repo: https://github.com/pycqa/flake8 + rev: 6.1.0 +- hooks: + - args: + - --py36-plus + id: pyupgrade + repo: https://github.com/asottile/pyupgrade + rev: v3.10.1 +- hooks: + - id: black + repo: https://github.com/psf/black + rev: 23.7.0 +- hooks: + - additional_dependencies: + - types-attrs + - types-requests + - types-setuptools + - types-PyYAML + - types-toml + args: + - --ignore-missing-imports + - --no-implicit-optional + id: mypy + repo: https://github.com/pre-commit/mirrors-mypy + rev: v1.5.1 +- hooks: + - args: + - --convention=google + - --add-ignore=D104 + id: pydocstyle + repo: https://github.com/pycqa/pydocstyle + rev: 6.3.0 +- hooks: + - id: blacken-docs + repo: https://github.com/asottile/blacken-docs + rev: 1.16.0 +- hooks: + - id: trailing-whitespace + - id: end-of-file-fixer + - id: debug-statements + - id: check-case-conflict + - id: check-json + - id: check-added-large-files + - id: check-yaml + - id: mixed-line-ending + - id: check-toml + - id: pretty-format-json + - id: check-docstring-first + - id: check-symlinks + - id: detect-private-key + - id: pretty-format-json + args: + - --autofix + repo: https://github.com/pre-commit/pre-commit-hooks + rev: v4.4.0 +- hooks: + - args: + - -iii + - -lll + id: bandit + repo: https://github.com/PyCQA/bandit + rev: 1.7.5 +- hooks: + - additional_dependencies: + - radon + args: + - cc + - --min=C + - --total-average + entry: radon + id: radon + language: python + name: radon + verbose: true + repo: local +- hooks: + - id: commitizen + stages: + - commit-msg + repo: https://github.com/commitizen-tools/commitizen + rev: 3.6.0 diff --git a/README.md b/README.md index f9ca30d..09cc6ad 100644 --- a/README.md +++ b/README.md @@ -1,13 +1,13 @@ fitburst ======== -This repo contains functions and objects for modeling dynamic spectra of dispersed astrophysical signals at radio frequencies. +This repo contains functions and objects for modeling dynamic spectra of dispersed astrophysical signals at radio frequencies. ## Installation Currently, `fitburst` can be installed by cloning the repo and running `pip` in the following way: -``` +``` pc> git clone git@github.com:CHIMEFRB/fitburst.git pc> cd fitburst pc/fitburst> pip install . # add the --user option if you're looking to install in your local environment. diff --git a/mkdocs.yml b/mkdocs.yml index a525ada..85d1211 100644 --- a/mkdocs.yml +++ b/mkdocs.yml @@ -71,12 +71,12 @@ nav: - Home: index.md - 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