From 676e79177c899053abc32029a56d3066dbc898c7 Mon Sep 17 00:00:00 2001 From: Florian Wuennemann Date: Wed, 29 Nov 2023 15:27:14 +0000 Subject: [PATCH 1/2] Added stardist 0.8.5 recipe. --- stardist/0.8.5/Dockerfile | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) create mode 100644 stardist/0.8.5/Dockerfile diff --git a/stardist/0.8.5/Dockerfile b/stardist/0.8.5/Dockerfile new file mode 100644 index 00000000..41659c01 --- /dev/null +++ b/stardist/0.8.5/Dockerfile @@ -0,0 +1,26 @@ +FROM tensorflow/tensorflow:2.11.0-gpu-jupyter + +LABEL base_image="tensorflow:2.11.0-gpu-jupyter" +LABEL maintainer="ko.sugawara@ens-lyon.fr" +LABEL software="stardist" +LABEL software.version="0.8.5" +LABEL about.license="BSD-3-Clause" +LABEL about.license_file="https://github.com/stardist/stardist/blob/master/LICENSE.txt" + +MAINTAINER Florian Wuennemann + +ARG DEBIAN_FRONTEND="noninteractive" +ARG STARDIST_VERSION="0.8.5" +ARG NVIDIA_DRIVER_VERSION=470 + +RUN apt-get update && apt-get install -y --no-install-recommends \ + ocl-icd-dev \ + ocl-icd-opencl-dev \ + opencl-headers \ + clinfo \ + libnvidia-compute-${NVIDIA_DRIVER_VERSION} \ + && apt-get clean \ + && rm -rf /var/lib/apt/lists/* + +RUN python3 -m pip install --upgrade pip +RUN pip install stardist==$STARDIST_VERSION gputools edt \ No newline at end of file From 1a5a7627bae21e11843c7229594de292880ba99e Mon Sep 17 00:00:00 2001 From: Florian Wuennemann Date: Wed, 29 Nov 2023 15:32:00 +0000 Subject: [PATCH 2/2] Added missing checklist items. --- stardist/0.8.5/Dockerfile | 3 +++ 1 file changed, 3 insertions(+) diff --git a/stardist/0.8.5/Dockerfile b/stardist/0.8.5/Dockerfile index 41659c01..14fe3ccb 100644 --- a/stardist/0.8.5/Dockerfile +++ b/stardist/0.8.5/Dockerfile @@ -1,9 +1,12 @@ FROM tensorflow/tensorflow:2.11.0-gpu-jupyter LABEL base_image="tensorflow:2.11.0-gpu-jupyter" +LABEL version="1" LABEL maintainer="ko.sugawara@ens-lyon.fr" LABEL software="stardist" LABEL software.version="0.8.5" +LABEL about.summary="Object Detection with Star-convex Shapes." +LABEL about.home="https://github.com/stardist/stardist" LABEL about.license="BSD-3-Clause" LABEL about.license_file="https://github.com/stardist/stardist/blob/master/LICENSE.txt"